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Meg22_1214_Bin_231_scaffold_20530

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1214_Bin_231_scaffold_20530_1
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(3..515)
DNA (513bp) protein (171aa)
Thermostable uracil-DNA glycosylase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9V0U7_PYRAB
DNA polymerase
Thermostable uracil-DNA glycosylase {ECO:0000313|EMBL:CAB49606.1}; Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:CCE70083.1}; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus abyssi (strain GE5 / Orsay).;"
Meg22_1214_Bin_231_scaffold_20530_2

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582..755
DNA (174bp) protein (58aa)
Marine sediment metagenome DNA, contig: S06H3_S00609 {ECO:0000313|EMBL:GAI27285.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=1250557 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
ycaR
Meg22_1214_Bin_231_scaffold_20530_3
unknown

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comp(756..1406)
DNA (651bp) protein (217aa)

This feature has no annotations

Meg22_1214_Bin_231_scaffold_20530_4

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1407..2390
DNA (984bp) protein (328aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL85417.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Dihydroorotate dehydrogenase id=4162447 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
dihydroorotate dehydrogenase
Meg22_1214_Bin_231_scaffold_20530_5
Methanocaldococcus jannaschii, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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2383..3180
DNA (798bp) protein (266aa)
dihydroorotate dehydrogenase electron transfer subunit (EC:1.3.5.2)
Probable dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=PYRK_METJA
Probable dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000255|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000255|HAMAP-Rule:MF_01211}; TaxID=243232 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 /; JCM 10045 / NBRC 100440) (Methanococcus jannaschii).;"
Meg22_1214_Bin_231_scaffold_20530_6
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(3193..3900)
DNA (708bp) protein (236aa)
alias=gwa2_scaffold_2089_6 id=18248565 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
Meg22_1214_Bin_231_scaffold_20530_7
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(3897..4853)
DNA (957bp) protein (319aa)
alias=gwa2_scaffold_2089_8 id=18248567 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
Meg22_1214_Bin_231_scaffold_20530_8
unknown

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comp(4938..5087)
DNA (150bp) protein (50aa)

This feature has no annotations

Meg22_1214_Bin_231_scaffold_20530_9
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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5217..5618
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Methanothermobacter RepID=D9PUV7_METTM
hypothetical protein
Tax=RBG_16_Micrarchaeota_49_10_curated
Meg22_1214_Bin_231_scaffold_20530_10
AR10, Diapherotrites, DPANN, Archaea

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comp(5588..6208)
DNA (621bp) protein (207aa)
hypothetical protein
Thr/Ser protein kinase; K07176 putative serine/threonine protein kinase id=5240680 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Meg22_1214_Bin_231_scaffold_20530_11
RHI_OP11_Roizmanbacteria_37_23, Roizmannbacteria, Microgenomates, Bacteria

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comp(6205..6792)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037003C0
maf protein
Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_37_23_curated
Meg22_1214_Bin_231_scaffold_20530_12

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6947..8581
DNA (1635bp) protein (545aa)
chaperonin Hsp60 GroEL-like
hsp60-2; chaperonin Hsp60 (GroEL-like) id=5240674 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Chaperonin Hsp60 GroEL-like {ECO:0000313|EMBL:AJF59667.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg22_1214_Bin_231_scaffold_20530_13

Not on your lists

8653..9180
DNA (528bp) protein (176aa)
Marine sediment metagenome DNA, contig: S01H1_S04158 {ECO:0000313|EMBL:GAF86333.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
hypothetical protein id=5240673 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Meg22_1214_Bin_231_scaffold_20530_14

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9215..9901
DNA (687bp) protein (229aa)
MscS family protein
MscS family protein id=5240672 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
MscS family protein {ECO:0000313|EMBL:AJF59665.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg22_1214_Bin_231_scaffold_20530_15

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10034..10378
DNA (345bp) protein (115aa)
replication factor A1
single-stranded DNA-binding protein; K07466 replication factor A1 id=5240671 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Replication factor A1 {ECO:0000313|EMBL:AJF59664.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Meg22_1214_Bin_231_scaffold_20530_16
unknown

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10574..10693
DNA (120bp) protein (40aa)

This feature has no annotations

Meg22_1214_Bin_231_scaffold_20530_17
CG_Micra_05, Micraarchaeota, Archaea

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10632..11258
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LN91_THEBM
hypothetical protein
Tax=CG_Micra_05
Meg22_1214_Bin_231_scaffold_20530_18
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

11255..11488
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A9EC5
hypothetical protein
Tax=CG_Micra_05
Meg22_1214_Bin_231_scaffold_20530_19
unknown

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comp(11525..11677)
DNA (153bp) protein (51aa)

This feature has no annotations

Meg22_1214_Bin_231_scaffold_20530_trna_1
unknown

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11542..11655
DNA (114bp)
transferRNA Ile
Displaying 20 items

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