ggKbase home page

Meg22_1416_Bin_28_scaffold_14998

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1416_Bin_28_scaffold_14998_1
unknown

Not on your lists

comp(479..811)
DNA (333bp) protein (111aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_14998_2

Not on your lists

908..2329
DNA (1422bp) protein (474aa)
Cysteine--tRNA ligase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XP92_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN30563.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cysteinyl-tRNA synthetase
Meg22_1416_Bin_28_scaffold_14998_3
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

2355..2540
DNA (186bp) protein (62aa)
4Fe-4S binding domain protein n=2 Tax=Clostridiales RepID=B0AA88_9FIRM
hypothetical protein
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Meg22_1416_Bin_28_scaffold_14998_4
unknown

Not on your lists

comp(2552..2896)
DNA (345bp) protein (115aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_14998_5
R_OD1_Wolfebacteria_41_13b, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(2946..3548)
DNA (603bp) protein (201aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0SNY8_IGNAA
glycerophosphoryl diester phosphodiesterase
Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_41_13b_curated
Meg22_1416_Bin_28_scaffold_14998_6
unknown

Not on your lists

comp(3939..4226)
DNA (288bp) protein (96aa)

This feature has no annotations

Meg22_1416_Bin_28_scaffold_14998_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

4319..4495
DNA (177bp) protein (59aa)
Preprotein translocase Sec, Sec61-beta subunit id=5799959 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
Meg22_1416_Bin_28_scaffold_14998_8
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

4539..5339
DNA (801bp) protein (267aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1L0G3_9EURY
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:EHP84886.1}; TaxID=647171 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris formicicus Mc-S-70.;"
xylose isomerase domain-containing protein
Meg22_1416_Bin_28_scaffold_14998_9
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5345..5968)
DNA (624bp) protein (208aa)
tmk; thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase id=4922380 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
Meg22_1416_Bin_28_scaffold_14998_10
Methanocaldococcus fervens, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

6006..7337
DNA (1332bp) protein (444aa)
Acetyl coenzyme A synthetase (ADP forming), alpha domain protein n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P9E9_METFA
acetyl CoA synthetase
Acetyl coenzyme A synthetase (ADP forming), alpha domain protein {ECO:0000313|EMBL:ACV25181.1}; TaxID=573064 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86); (Methanococcus fervens).;"
Meg22_1416_Bin_28_scaffold_14998_11
Fervidicoccus fontis, Fervidicoccus, Fervidicoccales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(7349..7951)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI000371A4C7
Acyl-CoA synthetase (NDP forming), beta subunit
Acyl-CoA synthetase (NDP forming), beta subunit {ECO:0000313|EMBL:AFH43201.1}; TaxID=1163730 species="Archaea; Crenarchaeota; Thermoprotei; Fervidicoccales; Fervidicoccaceae; Fervidicoccus.;" source="Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940).;"
Meg22_1416_Bin_28_scaffold_14998_12
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7990..8511
DNA (522bp) protein (174aa)
pyruvate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.1)
Pyruvate/ketoisovalerate oxidoreductase, gamma subunit {ECO:0000313|EMBL:ABS55193.1}; EC=1.2.7.1 {ECO:0000313|EMBL:ABS55193.1};; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula boonei (strain 6A8).;"
Pyruvate/ketoisovalerate oxidoreductase, gamma subunit n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I632_METB6
Meg22_1416_Bin_28_scaffold_14998_13
RBG_13_Spirochaetes_51_14_curated, Spirochaetes, Bacteria

Not on your lists

8513..8779
DNA (267bp) protein (89aa)
Pyruvic-ferredoxin oxidoreductase, delta subunit n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z8I6_DEHE1
porD; 2-oxoacid:ferredoxin oxidoreductase subunit delta
Tax=RBG_13_Spirochaetes_51_14_curated
Meg22_1416_Bin_28_scaffold_14998_14
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

8779..9978
DNA (1200bp) protein (400aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VTJ4_9EURY
Pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein {ECO:0000313|EMBL:ENN96496.1}; TaxID=1069083 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus villosus KIN24-T80.;"
PorA_1; pyruvate:ferredoxin oxidoreductase, alpha subunit
Meg22_1416_Bin_28_scaffold_14998_15
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

9978..10883
DNA (906bp) protein (302aa)
Thiamine pyrophosphate protein domain protein TPP-binding protein n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S809_METSF
thiamine pyrophosphate protein domain protein TPP-binding protein
Thiamine pyrophosphate protein domain protein TPP-binding protein {ECO:0000313|EMBL:ADC69169.1}; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. (strain FS406-22).;"
Meg22_1416_Bin_28_scaffold_14998_16
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10940..13984
DNA (3045bp) protein (1015aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IYX9_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGW20151.1}; Flags: Precursor;; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein
Meg22_1416_Bin_28_scaffold_14998_trna_1
unknown

Not on your lists

14522..14593
DNA (72bp)
transferRNA Arg
Meg22_1416_Bin_28_scaffold_14998_17
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

14638..15819
DNA (1182bp) protein (394aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ALL8_METOI
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEH06566.1}; TaxID=647113 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanothermococcus.;" source="Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1).;"
Displaying 18 items

View Taxonomy