ggKbase home page

Meg22_1416_Bin_53_scaffold_36633

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_1416_Bin_53_scaffold_36633_1
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

1..714
DNA (714bp) protein (238aa)
Probable DNA repair protein Niako_1575 id=3737925 bin=GWA2_TM6_36_9 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_TM6_36_9 organism_group=TM6
ykoV; DNA repair protein YkoV
Tax=AR13
Meg22_1416_Bin_53_scaffold_36633_2
unknown

Not on your lists

711..821
DNA (111bp) protein (37aa)

This feature has no annotations

Meg22_1416_Bin_53_scaffold_36633_3
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

802..1644
DNA (843bp) protein (281aa)
DNA polymerase LigD, ligase domain protein (EC:6.5.1.1)
DNA ligase D, ligase domain {ECO:0000313|EMBL:AKG91197.1}; EC=6.5.1.1 {ECO:0000313|EMBL:AKG91197.1};; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus ahangari.;"
DNA ligase, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28549_ARCFU
Meg22_1416_Bin_53_scaffold_36633_4
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(1648..2748)
DNA (1101bp) protein (367aa)
23S rRNA (Uracil-5-)-methyltransferase 1 n=1 Tax=Thermococcus sp. CL1 RepID=I3ZUM1_9EURY
tRNA (uracil(54)-C5)-methyltransferase
Tax=BJP_IG2069_Spirochaetales_48_31
Meg22_1416_Bin_53_scaffold_36633_5
CG_Kuenen_03, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2781..3140)
DNA (360bp) protein (120aa)
nucleotidyltransferase n=1 Tax=Sulfolobus islandicus RepID=UPI00035D45B0
nucleotidyl transferase
Tax=CG_Kuenen_03
Meg22_1416_Bin_53_scaffold_36633_6
unknown

Not on your lists

comp(3130..3294)
DNA (165bp) protein (55aa)

This feature has no annotations

Meg22_1416_Bin_53_scaffold_36633_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(3332..3748)
DNA (417bp) protein (139aa)
30S ribosomal protein S9 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF5_METFV id=5103678 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S9
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_36633_8
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists


comp(3790..4113)
DNA (324bp) protein (108aa)
50S ribosomal protein L13 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HLI6_ACIS0
ribosomal protein L13, archaeal/eukaryotic
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp. (strain MAR08-339).;"
Meg22_1416_Bin_53_scaffold_36633_9
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(4115..4489)
DNA (375bp) protein (125aa)
50S ribosomal protein L18e n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RWV9_THEPD
50S ribosomal protein L18e
Tax=RBG_13_Pacearchaeota_33_26_curated
Meg22_1416_Bin_53_scaffold_36633_trna_1
unknown

Not on your lists

comp(4500..4583)
DNA (84bp)
transferRNA Leu
Meg22_1416_Bin_53_scaffold_36633_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4625..5404)
DNA (780bp) protein (260aa)
DNA-directed RNA polymerase subunit D n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX00_FERPA
RNA polymerase insert
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_36633_11
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists


comp(5429..5821)
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=1 Tax=Thermococcus zilligii RepID=UPI000299D2B8
rps11p; 30S ribosomal protein S11
Tax=CG_Pacearch_02
Meg22_1416_Bin_53_scaffold_36633_12
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


comp(5828..6484)
DNA (657bp) protein (219aa)
30S ribosomal protein S4 id=4922289 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S4
Tax=CG_Pacearch_03
Meg22_1416_Bin_53_scaffold_36633_13

Not on your lists


comp(6491..6967)
DNA (477bp) protein (159aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
30S ribosomal protein S13
Meg22_1416_Bin_53_scaffold_36633_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(6969..7514)
DNA (546bp) protein (182aa)
hypothetical protein; K07572 putative nucleotide binding protein id=5051518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_36633_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(7511..7813)
DNA (303bp) protein (101aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
Meg22_1416_Bin_53_scaffold_36633_16
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(7810..8064)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-E04 RepID=UPI00037C53DA
ribosomal protein L21e
Tax=RBG_16_Pacearchaeota_35_8_curated
Meg22_1416_Bin_53_scaffold_36633_17
unknown

Not on your lists

comp(8061..8387)
DNA (327bp) protein (109aa)

This feature has no annotations

Meg22_1416_Bin_53_scaffold_36633_18
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(8431..8634)
DNA (204bp) protein (68aa)
Tax=CG_Pacearch_06
Meg22_1416_Bin_53_scaffold_36633_19
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists


9053..9250
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit N
Tax=CG_Pacearch_04
Displaying 20 items

View Taxonomy