ggKbase home page

Meg22_46_Bin_231_scaffold_38962

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Meg22_46_Bin_231_scaffold_38962_1
nanoarchaeote Nst1, Nanoarchaeota, Archaea

Not on your lists


3..260
DNA (258bp) protein (86aa)
50S ribosomal protein L21e n=1 Tax=nanoarchaeote Nst1 RepID=R1E4U4_9ARCH
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1294122 species="Archaea; Nanoarchaeota.;" source="nanoarchaeote Nst1.;"
50S ribosomal protein L21e
Meg22_46_Bin_231_scaffold_38962_2

Not on your lists

307..639
DNA (333bp) protein (111aa)
Conserved protein n=2 Tax=Methanothermobacter RepID=O27379_METTH id=5103693 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO51091.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
hypothetical protein
Meg22_46_Bin_231_scaffold_38962_3

Not on your lists

654..1211
DNA (558bp) protein (186aa)
DNA-binding protein n=3 Tax=Pyrococcus RepID=Q8TZW3_PYRFU id=5103692 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJF62970.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Meg22_46_Bin_231_scaffold_38962_4
unknown

Not on your lists

1248..1589
DNA (342bp) protein (114aa)

This feature has no annotations

Meg22_46_Bin_231_scaffold_38962_5
Bacillus subterraneus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1576..2052)
DNA (477bp) protein (159aa)
Methyltransferase type 11 n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YVL4_9THEM
Uncharacterized protein {ECO:0000313|EMBL:KIY20965.1}; TaxID=285983 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subterraneus.;"
type 11 methyltransferase
Meg22_46_Bin_231_scaffold_38962_6
R_RIF_OD1_03_45_10, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

2103..2696
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CYV5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_45_10_curated
Meg22_46_Bin_231_scaffold_38962_7
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

2696..3049
DNA (354bp) protein (118aa)
Tax=CG_Pacearch_02
Meg22_46_Bin_231_scaffold_38962_8
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


3075..3665
DNA (591bp) protein (197aa)
DNA-directed RNA polymerase (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ENO11844.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
Meg22_46_Bin_231_scaffold_38962_9

Not on your lists

3711..3890
DNA (180bp) protein (60aa)
DNA-directed RNA polymerase, subunit E'' (EC:2.7.7.6)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000381271C
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Meg22_46_Bin_231_scaffold_38962_10

Not on your lists

3892..4344
DNA (453bp) protein (151aa)
Marine sediment metagenome DNA, contig: S01H4_L04638 {ECO:0000313|EMBL:GAG88509.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Meg22_46_Bin_231_scaffold_38962_11
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

4344..4562
DNA (219bp) protein (73aa)
30S ribosomal protein S27ae n=1 Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=A6UTQ1_META3
30S ribosomal protein S27a
Tax=CG_CPArch01-01
Meg22_46_Bin_231_scaffold_38962_12
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

4563..5474
DNA (912bp) protein (304aa)
Deoxyhypusine synthase {ECO:0000313|EMBL:EMR75204.1}; EC=2.5.1.46 {ECO:0000313|EMBL:EMR75204.1};; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
deoxyhypusine synthase (EC:2.5.1.46)
Deoxyhypusine synthase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T8U1_9EURY
Meg22_46_Bin_231_scaffold_38962_13
unknown

Not on your lists

5499..5930
DNA (432bp) protein (144aa)

This feature has no annotations

Meg22_46_Bin_231_scaffold_38962_14
unknown

Not on your lists

comp(5940..6143)
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying 14 items

View Taxonomy