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SCGC_AAA011_G17_4

Alias: A11G17DRAFT_contig_3_0.4

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Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCGC_AAA011_G17_4_1
unknown

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comp(2..778)
-----------------
DNA (777bp)
protein (259aa)
DNA topoisomerase VI, subunit B
DNA topoisomerase VI, subunit B n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEY4_9BACT Tax=AR20
DNA topoisomerase VI, subunit B
SCGC_AAA011_G17_4_2
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(812..1339)
-----------------
DNA (528bp)
protein (176aa)
KH domain protein; K06961 ribosomal RNA assembly protein Tax=CG_Woesearch_02
hypothetical protein
arCOG04150 universal archaeal KH domain protein
SCGC_AAA011_G17_4_3
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1342..1689)
-----------------
DNA (348bp)
protein (116aa)
translation initiation factor IF-1; K03236 translation initiation factor 1A Tax=CG_Woesearch_02
Translation initiation factor 1A
eukaryotic/archaeal initiation factor 1A
SCGC_AAA011_G17_4_4

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comp(1714..2451)
-----------------
DNA (738bp)
protein (246aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO53920.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
NMD protein affecting ribosome stability and mRNA decay
SCGC_AAA011_G17_4_5
unknown

Not on your lists

comp(2448..2771)
-----------------
DNA (324bp)
protein (108aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8A2_METEZ Tax=AR20
Uncharacterized conserved protein
SCGC_AAA011_G17_4_6
GW2011_AR20, GW2011_AR20, GW2011_AR20, GW2011_AR20, Archaeon, Archaea

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comp(2753..3184)
-----------------
DNA (432bp)
protein (144aa)
hypothetical protein
hypothetical protein
SCGC_AAA011_G17_4_7
unknown

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comp(3186..3593)
-----------------
DNA (408bp)
protein (136aa)
Translation initiation factor 2 subunit beta
Translation initiation factor 2 subunit beta n=2 Tax=Methanothermobacter RepID=IF2B_METTH Tax=AR20
translation initiation factor aIF-2, beta subunit, putative
SCGC_AAA011_G17_4_8
AR15, Woesearchaeaota, DPANN, Archaea

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comp(3596..4210)
-----------------
DNA (615bp)
protein (205aa)
Nucleic acid-binding, OB-fold-like Tax=AR15
hypothetical protein
Uncharacterized protein conserved in archaea
SCGC_AAA011_G17_4_9

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comp(4212..6227)
-----------------
DNA (2016bp)
protein (672aa)
DNA replication initiator Cdc21/Cdc54
DNA replication initiator Cdc21/Cdc54 {ECO:0000313|EMBL:AJF62505.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Predicted ATPase involved in replication control, Cdc46/Mcm family
SCGC_AAA011_G17_4_10

Not on your lists

comp(6255..6794)
-----------------
DNA (540bp)
protein (180aa)
Marine sediment metagenome DNA, contig: S12H4_S05138 {ECO:0000313|EMBL:GAI96315.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
TATA-box-binding protein
TATA-box binding protein (TBP), component of TFIID and TFIIIB
SCGC_AAA011_G17_4_11
R_RIF_OD1_02_44_13, RIF-OD1-2, Parcubacteria, Bacteria

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comp(6951..7889)
-----------------
DNA (939bp)
protein (313aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_02_44_13_curated
Uncharacterized conserved protein
SCGC_AAA011_G17_4_12

Not on your lists

comp(7886..10678)
-----------------
DNA (2793bp)
protein (931aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1579378 species="Archaea.;"
Isoleucine-tRNA ligase
isoleucyl-tRNA synthetase
SCGC_AAA011_G17_4_13
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(10716..10889)
-----------------
DNA (174bp)
protein (58aa)
hypothetical protein Tax=CG_Woesearch_03
hypothetical protein
SCGC_AAA011_G17_4_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(10879..11451)
-----------------
DNA (573bp)
protein (191aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
hypothetical protein
SCGC_AAA011_G17_4_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11534..12478
-----------------
DNA (945bp)
protein (315aa)
rfc; replication factor C small subunit; K04801 replication factor C small subunit Tax=CG_Woesearch_02
Replication factor C small subunit
DNA polymerase III, gamma/tau subunits
SCGC_AAA011_G17_4_16
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

12511..13527
-----------------
DNA (1017bp)
protein (339aa)
translation initiation factor aIF-2
Translation initiation factor aIF-2 {ECO:0000313|EMBL:ADC69173.1}; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Met
Intein/homing endonuclease
SCGC_AAA011_G17_4_17
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

13563..13949
-----------------
DNA (387bp)
protein (129aa)
hypothetical protein
Tax=AR20
hypothetical protein
SCGC_AAA011_G17_4_18

Not on your lists

13946..15088
-----------------
DNA (1143bp)
protein (381aa)
Marine sediment metagenome DNA, contig: S12H4_L01143 {ECO:0000313|EMBL:GAI84823.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Replication factor C large subunit
ATPase related to the helicase subunit of the Holliday junction resolvase
SCGC_AAA011_G17_4_19
unknown

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15120..16040
-----------------
DNA (921bp)
protein (307aa)
hypothetical protein
SCGC_AAA011_G17_4_20

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16074..16361
-----------------
DNA (288bp)
protein (96aa)
Replication factor A1 {ECO:0000313|EMBL:KHO50628.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
replication factor A1
Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins
SCGC_AAA011_G17_4_21
unknown

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comp(16377..17006)
-----------------
DNA (630bp)
protein (210aa)
hypothetical protein
SCGC_AAA011_G17_4_22
unknown

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17132..17485
-----------------
DNA (354bp)
protein (118aa)
hypothetical protein
SCGC_AAA011_G17_4_23
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

17488..18816
-----------------
DNA (1329bp)
protein (443aa)
nucleotidyltransferase; K06915 Tax=AR17
hypothetical protein
Predicted ATPase
SCGC_AAA011_G17_4_24
unknown

Not on your lists

comp(18805..19437)
-----------------
DNA (633bp)
protein (211aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AAJ1_9EURY Tax=AR20
hypothetical protein
SCGC_AAA011_G17_4_25
unknown

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19482..19826
-----------------
DNA (345bp)
protein (115aa)
hypothetical protein
SCGC_AAA011_G17_4_26
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(19816..20553)
-----------------
DNA (738bp)
protein (246aa)
hypothetical protein; K15429 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
Predicted methyltransferase
SCGC_AAA011_G17_4_27
unknown

Not on your lists

20624..21685
-----------------
DNA (1062bp)
protein (354aa)
hypothetical protein
SCGC_AAA011_G17_4_28
unknown

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21773..22828
-----------------
DNA (1056bp)
protein (352aa)
hypothetical protein
SCGC_AAA011_G17_4_29

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comp(22825..23838)
-----------------
DNA (1014bp)
protein (338aa)
Flap endonuclease 1
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
flap structure-specific endonuclease
SCGC_AAA011_G17_4_30
unknown

Not on your lists

comp(23828..25252)
-----------------
DNA (1425bp)
protein (475aa)
hypothetical protein
Displaying items 1-30 of 122 in total

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