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SCGC_AAA011_L22_17

Alias: DUSEL4COM1_contig_17_0.17

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCGC_AAA011_L22_17_1
unknown

Not on your lists

comp(3..89)
DNA (87bp) protein (29aa)
hypothetical protein
SCGC_AAA011_L22_17_2

Not on your lists


comp(518..1105)
DNA (588bp) protein (196aa)
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000313|EMBL:AJF63045.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Ribosomal protein S7
SCGC_AAA011_L22_17_3
Caldivirga maquilingensis, Caldivirga, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists


comp(1102..3057)
DNA (1956bp) protein (652aa)
30S ribosomal protein S12
Ribosomal protein S12/S23 {ECO:0000313|EMBL:ABW01170.1}; TaxID=397948 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Caldivirga.;" source="Caldivirga maquilingensis
Intein/homing endonuclease
SCGC_AAA011_L22_17_4

Not on your lists

comp(3060..3473)
DNA (414bp) protein (138aa)
Marine sediment metagenome DNA, contig: S01H1_S20770 {ECO:0000313|EMBL:GAG19749.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
hypothetical protein
SCGC_AAA011_L22_17_5
unknown

Not on your lists

comp(3609..4538)
DNA (930bp) protein (310aa)
Uncharacterized protein conserved in archaea
SCGC_AAA011_L22_17_6

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comp(4578..4826)
DNA (249bp) protein (83aa)
Marine sediment metagenome DNA, contig: S01H1_S20770 {ECO:0000313|EMBL:GAG19745.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L30e
Ribosomal protein L30E
SCGC_AAA011_L22_17_7
unknown

Not on your lists

comp(4823..7393)
DNA (2571bp) protein (857aa)
DNA-directed RNA polymerase subunit A''
DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RPOA2_METJA Tax=AR20
hypothetical protein
SCGC_AAA011_L22_17_8
unknown

Not on your lists

comp(7390..9963)
DNA (2574bp) protein (858aa)
DNA-directed RNA polymerase
DNA-directed RNA polymerase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR8_METFV Tax=AR20
DNA-directed RNA polymerase, subunit A' (EC 2.7.7.6)
SCGC_AAA011_L22_17_9

Not on your lists

comp(9965..11767)
DNA (1803bp) protein (601aa)
DNA-directed RNA polymerase
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
DNA-directed RNA polymerase, subunit B' (EC 2.7.7.6)
SCGC_AAA011_L22_17_10
unknown

Not on your lists

comp(11764..13248)
DNA (1485bp) protein (495aa)
DNA-directed RNA polymerase
DNA-directed RNA polymerase n=6 Tax=Thermococcus RepID=Q5JE32_PYRKO Tax=AR20
hypothetical protein
SCGC_AAA011_L22_17_11

Not on your lists

comp(13241..13486)
DNA (246bp) protein (82aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
DNA-directed RNA polymerase, subunit H (EC 2.7.7.6)
SCGC_AAA011_L22_17_12
unknown

Not on your lists

comp(13679..14053)
DNA (375bp) protein (125aa)
hypothetical protein
SCGC_AAA011_L22_17_13
unknown

Not on your lists

comp(14088..14366)
DNA (279bp) protein (93aa)
hypothetical protein
SCGC_AAA011_L22_17_14
GWB1_OP11_40_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(14432..14740)
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR72602.1}; TaxID=1618482 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWB1_40_7.;"
hypothetical protein
Predicted pyrophosphatase
SCGC_AAA011_L22_17_15
unknown

Not on your lists

comp(14809..14918)
DNA (110bp)
transferRNA
SCGC_AAA011_L22_17_16

Not on your lists

comp(15365..15487)
DNA (123bp) protein (41aa)
Marine sediment metagenome DNA, contig: S03H2_C02196 {ECO:0000313|EMBL:GAH25182.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Desulfoferrodoxin Dfx domain protein
hypothetical protein
SCGC_AAA011_L22_17_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

15530..16339
DNA (810bp) protein (270aa)
hypothetical protein; K09716 hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
Uncharacterized protein conserved in archaea
SCGC_AAA011_L22_17_18
unknown

Not on your lists

16393..16824
DNA (432bp) protein (144aa)
hypothetical protein
SCGC_AAA011_L22_17_19
unknown

Not on your lists

16876..17112
DNA (237bp) protein (79aa)
hypothetical protein
SCGC_AAA011_L22_17_20
unknown

Not on your lists

17109..17405
DNA (297bp) protein (99aa)
hypothetical protein
SCGC_AAA011_L22_17_21
unknown

Not on your lists

comp(17406..18137)
DNA (732bp) protein (244aa)
Prolipoprotein diacylglyceryl transferase
Prolipoprotein diacylglyceryl transferase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0P8_9BACT Tax=AR20
Prolipoprotein diacylglyceryltransferase
SCGC_AAA011_L22_17_22
unknown

Not on your lists

comp(18189..18503)
DNA (315bp) protein (105aa)
hypothetical protein
SCGC_AAA011_L22_17_23
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

comp(18578..18925)
DNA (348bp) protein (116aa)
hypothetical protein Tax=CG_Micra_01
hypothetical protein
hypothetical protein
SCGC_AAA011_L22_17_24
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18925..19230)
DNA (306bp) protein (102aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB27147.1}; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
hypothetical protein
SCGC_AAA011_L22_17_25
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

19372..19692
DNA (321bp) protein (107aa)
Tax=AR18
hypothetical protein
hypothetical protein
SCGC_AAA011_L22_17_26
unknown

Not on your lists

comp(19774..20283)
DNA (510bp) protein (170aa)
hypothetical protein
SCGC_AAA011_L22_17_27
unknown

Not on your lists

comp(20366..21316)
DNA (951bp) protein (317aa)
hypothetical protein
SCGC_AAA011_L22_17_28

Not on your lists

comp(21406..21915)
DNA (510bp) protein (170aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
fibrillarin
Fibrillarin-like rRNA methylase
SCGC_AAA011_L22_17_29
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(21912..22568)
DNA (657bp) protein (219aa)
C/D box methylation guide ribonucleoprotein complex aNOP56 subunit; K14564 nucleolar protein 56 Tax=CG_Aenigma_01
pre-mRNA processing ribonucleoprotein
hypothetical protein
SCGC_AAA011_L22_17_30

Not on your lists

comp(22604..23170)
DNA (567bp) protein (189aa)
Marine sediment metagenome DNA, contig: S01H1_L06866 {ECO:0000313|EMBL:GAF82434.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Displaying items 1-30 of 34 in total

View Taxonomy