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AB_03_bin_104_scaffold_1757

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_03_bin_104_scaffold_1757_1
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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comp(57..1226)
DNA (1170bp) protein (390aa)
X-Pro dipeptidase {ECO:0000313|EMBL:BAI79948.1}; EC=3.4.13.9 {ECO:0000313|EMBL:BAI79948.1};; TaxID=639282 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferribacter.;" source="Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC; 101012 / SSM1).;"
UPI0003D67B57 related cluster n=1 Tax=unknown RepID=UPI0003D67B57
peptidase M24
AB_03_bin_104_scaffold_1757_2
Ignicoccus hospitalis, Ignicoccus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(1263..2738)
DNA (1476bp) protein (492aa)
Radical SAM domain protein n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8AC77_IGNH4
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABU82529.1}; TaxID=453591 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Ignicoccus.;" source="Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125).;"
AB_03_bin_104_scaffold_1757_3
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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2789..4480
DNA (1692bp) protein (564aa)
tRNA-guanine(15) transglycosylase {ECO:0000255|HAMAP-Rule:MF_01634}; EC=2.4.2.48 {ECO:0000255|HAMAP-Rule:MF_01634};; 7-cyano-7-deazaguanine tRNA-ribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01634}; Archaeal tRNA-guanine transglycosylase {ECO:0000255|HAMAP-Rule:MF_01634}; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus abyssi (strain GE5 / Orsay).;"
tRNA-guanine(15) transglycosylase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=ATGT_PYRAB
tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase
AB_03_bin_104_scaffold_1757_4
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(4475..4897)
DNA (423bp) protein (141aa)
transmembrane_regions id=18248686 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
AB_03_bin_104_scaffold_1757_5
unknown

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comp(4851..4988)
DNA (138bp) protein (46aa)

This feature has no annotations

AB_03_bin_104_scaffold_1757_6
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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5064..6113
DNA (1050bp) protein (350aa)
Type II secretion system protein A id=18248689 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
ATPase
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_03_bin_104_scaffold_1757_7
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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6166..6429
DNA (264bp) protein (88aa)
Putative uncharacterized protein id=2636957 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
PRC-barrel protein
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_03_bin_104_scaffold_1757_8
CG_Micra_05, Micraarchaeota, Archaea

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comp(6467..7477)
DNA (1011bp) protein (337aa)
DNA repair and recombination RadA-like protein; K04483 DNA repair protein RadA id=5043016 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
DNA repair and recombination protein RadA
Tax=CG_Micra_05
AB_03_bin_104_scaffold_1757_9
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(7497..8522)
DNA (1026bp) protein (342aa)
Replication factor-A C terminal domain, OB-fold nucleic acid binding domain family protein id=2636723 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Nucleic acid binding OB-fold tRNA/helicase-type
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_03_bin_104_scaffold_1757_10
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(8581..8793)
DNA (213bp) protein (71aa)
Transcription factor CBF/NF-Y/histone domain protein n=2 Tax=Methanococcus voltae RepID=D7DRP5_METV3
transcription factor CBF/NF-Y/histone domain-containing protein
Histone HstB {ECO:0000313|EMBL:CAF74921.1}; TaxID=2188 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus voltae.;"
AB_03_bin_104_scaffold_1757_11
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(8803..11061)
DNA (2259bp) protein (753aa)
ATPase AAA (EC:3.6.1.3)
AAA family ATPase, CDC48 subfamily n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW02_METFV
Tax=CG_Aenigma_01
AB_03_bin_104_scaffold_1757_12
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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11221..11907
DNA (687bp) protein (229aa)
DNA repair and recombination protein radB; K04484 DNA repair protein RadB id=18312157 bin=Haloredivivus tax=Haloredivivus
DNA repair and recombination protein RadB {ECO:0000313|EMBL:EHK00609.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
DNA repair and recombination protein RadB
AB_03_bin_104_scaffold_1757_13
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(11973..14051)
DNA (2079bp) protein (693aa)
DNA topoisomerase 1 n=1 Tax=Thermococcus sp. CL1 RepID=I3ZSB6_9EURY
DNA topoisomerase, type IA
Tax=CG_Woesearch_01
AB_03_bin_104_scaffold_1757_14
unknown

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14159..14281
DNA (123bp) protein (41aa)

This feature has no annotations

AB_03_bin_104_scaffold_1757_15
unknown

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comp(14374..14601)
DNA (228bp) protein (76aa)

This feature has no annotations

AB_03_bin_104_scaffold_1757_16
unknown

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comp(15184..15393)
DNA (210bp) protein (70aa)

This feature has no annotations

AB_03_bin_104_scaffold_1757_17
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(15606..15902)
DNA (297bp) protein (99aa)
PadR-like protein family transcriptional regulator
PadR-like family transcriptional regulator id=5240645 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Aenigma_01
AB_03_bin_104_scaffold_1757_18

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comp(16241..17539)
DNA (1299bp) protein (433aa)
serS; Serine--tRNA ligase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EQ14_9ARCH
Marine sediment metagenome DNA, contig: S06H3_C00781 {ECO:0000313|EMBL:GAI02023.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AB_03_bin_104_scaffold_1757_19
unknown

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17598..18380
DNA (783bp) protein (261aa)

This feature has no annotations

Displaying 19 items

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