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AB_03_bin_104_scaffold_2554

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_03_bin_104_scaffold_2554_1
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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1..675
DNA (675bp) protein (225aa)
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_03_bin_104_scaffold_2554_2
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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675..1769
DNA (1095bp) protein (365aa)
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_03_bin_104_scaffold_2554_3
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(1869..2303)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-L14 RepID=UPI00036A70F8
signal transduction protein with CBS domains
Tax=RBG_16_Thaumarchaeota_49_8_curated
AB_03_bin_104_scaffold_2554_4
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(2333..3370)
DNA (1038bp) protein (346aa)
hypothetical protein id=5090624 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Integral membrane protein {ECO:0000313|EMBL:KKP36350.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
hypothetical protein
AB_03_bin_104_scaffold_2554_5
Aciduliprofundum sp. MAR08-339, Aciduliprofundum, Euryarchaeota, Archaea

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comp(3512..4183)
DNA (672bp) protein (224aa)
30S ribosomal protein S2 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMU0_ACIS0
ribosomal protein Sa/S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=673860 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum sp. (strain MAR08-339).;"
AB_03_bin_104_scaffold_2554_6
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(4381..5517)
DNA (1137bp) protein (379aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] id=18312385 bin=Haloredivivus tax=Haloredivivus
Enolase {ECO:0000256|RuleBase:RU000654}; EC=4.2.1.11 {ECO:0000256|RuleBase:RU000654};; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
AB_03_bin_104_scaffold_2554_7
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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5577..6227
DNA (651bp) protein (217aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
Probable tRNA sulfurtransferase n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GKU6_METPE
hypothetical protein
AB_03_bin_104_scaffold_2554_8
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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6302..6787
DNA (486bp) protein (162aa)
Cation antiporter n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CHR5_KOSOT
cation antiporter
Cation antiporter {ECO:0000313|EMBL:ACR80741.1}; Flags: Precursor;; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
AB_03_bin_104_scaffold_2554_9
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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6797..7051
DNA (255bp) protein (85aa)
Multisubunit Na+/H+ antiporter, MnhF subunit n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HN83_ACIS0
cation:proton antiporter
Cation:proton antiporter {ECO:0000313|EMBL:AIF68902.1}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
AB_03_bin_104_scaffold_2554_10
Rhodobacterales bacterium HTCC2255, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7048..7368
DNA (321bp) protein (107aa)
sodium:proton antiporter n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A1DBBC
Na+/H+ antiporter subunit {ECO:0000313|EMBL:EAU52089.1}; TaxID=367336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales.;" source="Rhodobacterales bacterium HTCC2255.;"
conserved membrane protein of unknown function
AB_03_bin_104_scaffold_2554_11
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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7365..7601
DNA (237bp) protein (79aa)
Membrane bound oxidoreductase, MbxD subunit (MbxD) n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUS8_9BACT
PH adaptation potassium efflux system protein B1, sodium-potassium/hydrogen antiporter subunit B1 {ECO:0000313|EMBL:KGE03541.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19751.;"
putative monovalent cation/H+ antiporter subunit B
AB_03_bin_104_scaffold_2554_12
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

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7623..7880
DNA (258bp) protein (86aa)
NADH/ubiquinone/plastoquinone (complex I); K05565 multicomponent Na+:H+ antiporter subunit A id=17311695 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_13_Caldithrix_44_9_curated
AB_03_bin_104_scaffold_2554_13
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

7880..8293
DNA (414bp) protein (138aa)
Putative Na(+) H(+) antiporter subunit B n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LLR1_THEBM
putative Na(+) H(+) antiporter subunit B
Putative Na(+) H(+) antiporter subunit B {ECO:0000313|EMBL:AHF80259.1}; TaxID=582419 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus paralvinellae.;"
AB_03_bin_104_scaffold_2554_14

Not on your lists

8290..8628
DNA (339bp) protein (113aa)
Putative Na(+)/H(+) antiporter subunit C n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QNA9_9CLOT
Marine sediment metagenome DNA, contig: S01H4_S05786 {ECO:0000313|EMBL:GAG93872.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
multisubunit Na+/H+ antiporter subunit MnhC
AB_03_bin_104_scaffold_2554_15
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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8625..10094
DNA (1470bp) protein (490aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E683_FLESM
Tax=RBG_19FT_COMBO_JS1_35_14_curated
AB_03_bin_104_scaffold_2554_16
unknown

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10091..10411
DNA (321bp) protein (107aa)

This feature has no annotations

AB_03_bin_104_scaffold_2554_17
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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10412..10861
DNA (450bp) protein (150aa)
NADH ubiquinone oxidoreductase n=1 Tax=Desulfovibrio oxyclinae RepID=UPI00035EA781
NADH-quinone oxidoreductase subunit B
NADH-quinone oxidoreductase, B subunit {ECO:0000313|EMBL:EGJ48936.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
AB_03_bin_104_scaffold_2554_18
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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10899..11576
DNA (678bp) protein (226aa)
pyrH; uridylate kinase (EC:2.7.4.22)
hypothetical protein n=1 Tax=Methanocaldococcus villosus RepID=UPI00036B88AC
Tax=RBG_13_Bathyarchaeota_52_12_curated
AB_03_bin_104_scaffold_2554_19

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11576..11962
DNA (387bp) protein (129aa)
NADH dehydrogenase (Ubiquinone) 30 kDa subunit n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NUN8_HALUD
Marine sediment metagenome DNA, contig: S06H3_S15274 {ECO:0000313|EMBL:GAI34253.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NADH dehydrogenase (ubiquinone) 30 kDa subunit
AB_03_bin_104_scaffold_2554_20
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

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11959..13113
DNA (1155bp) protein (385aa)
NADH-ubiquinone oxidoreductase, chain D (EC:1.6.5.3)
Ech hydrogenase subunit E id=3806599 bin=GWF2_Lentisphaerae_49_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
AB_03_bin_104_scaffold_2554_21
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

13103..13993
DNA (891bp) protein (297aa)
Carbon monoxide-induced hydrogenase, CooK subunit n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AB33_CARHZ
cooK; carbon monoxide-induced hydrogenase subunit CooK
Carbon monoxide-induced hydrogenase, CooK subunit {ECO:0000313|EMBL:ABB15714.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
AB_03_bin_104_scaffold_2554_22
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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13990..14325
DNA (336bp) protein (112aa)
NADH:ubiquinone oxidoreductase chain I-like protein n=2 Tax=unclassified Thermoplasmatales RepID=M7TSL0_9EURY
Fe-hydrogenase subunit beta
Tax=RBG_16_Bathyarchaeota_48_13_curated
AB_03_bin_104_scaffold_2554_23
unknown

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14336..14662
DNA (327bp) protein (109aa)

This feature has no annotations

AB_03_bin_104_scaffold_2554_24
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(14649..15080)
DNA (432bp) protein (144aa)
147aa long hypothetical hydrogenase n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58707_PYRHO
hydrogenase
147aa long hypothetical hydrogenase {ECO:0000313|EMBL:BAA30076.1}; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /; NBRC 100139 / OT-3).;"
AB_03_bin_104_scaffold_2554_25
unknown

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comp(15077..15469)
DNA (393bp) protein (131aa)

This feature has no annotations

AB_03_bin_104_scaffold_2554_26
unknown

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15520..15828
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying 26 items

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