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AB_03_bin_104_scaffold_4164

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_03_bin_104_scaffold_4164_1
unknown

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comp(1..189)
DNA (189bp) protein (63aa)

This feature has no annotations

AB_03_bin_104_scaffold_4164_2
unknown

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278..487
DNA (210bp) protein (70aa)

This feature has no annotations

AB_03_bin_104_scaffold_4164_3
AR15, Woesearchaeaota, DPANN, Archaea

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comp(502..1320)
DNA (819bp) protein (273aa)
Ribonuclease id=5800785 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rnhC; ribonuclease HIII
Tax=AR15
AB_03_bin_104_scaffold_4164_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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1387..3807
DNA (2421bp) protein (807aa)
ppsA5; protein PpsA5 (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] id=5045849 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
phosphoenolpyruvate synthase
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_03_bin_104_scaffold_4164_5

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4017..4346
DNA (330bp) protein (110aa)
Marine sediment metagenome DNA, contig: S01H1_S11054 {ECO:0000313|EMBL:GAG08667.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AB_03_bin_104_scaffold_4164_6
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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4537..5088
DNA (552bp) protein (184aa)
Histidine triad (HIT) protein id=4501555 bin=GWA2_OP3_52_12 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Hit-like protein involved in cell-cycle regulation
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
AB_03_bin_104_scaffold_4164_7
unknown

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5242..5562
DNA (321bp) protein (107aa)

This feature has no annotations

AB_03_bin_104_scaffold_4164_8
CG_Micra_04, Micraarchaeota, Archaea

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5595..8732
DNA (3138bp) protein (1046aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=5043974 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Tax=CG_Micra_04
AB_03_bin_104_scaffold_4164_9
unknown

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8768..9130
DNA (363bp) protein (121aa)

This feature has no annotations

AB_03_bin_104_scaffold_4164_10
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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9383..10276
DNA (894bp) protein (298aa)
transmembrane_regions id=18248108 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Peptidase A24A prepilin type IV
Tax=RBG_16_Micrarchaeota_49_10_curated
AB_03_bin_104_scaffold_4164_11
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(10280..12427)
DNA (2148bp) protein (716aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D2K6_METSW
Tax=AR11
AB_03_bin_104_scaffold_4164_12
unknown

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12488..12742
DNA (255bp) protein (85aa)

This feature has no annotations

AB_03_bin_104_scaffold_4164_13
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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12850..13140
DNA (291bp) protein (97aa)
UPI0003D1C425 related cluster n=1 Tax=unknown RepID=UPI0003D1C425
Uncharacterized protein {ECO:0000313|EMBL:ETA67845.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
hypothetical protein
Displaying 13 items

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