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AB_03_bin_104_scaffold_5553

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_03_bin_104_scaffold_5553_1
unknown

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2..1030
-----------------
DNA (1029bp)
protein (343aa)

This feature has no annotations

AB_03_bin_104_scaffold_5553_2
unknown

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1072..2874
-----------------
DNA (1803bp)
protein (601aa)

This feature has no annotations

AB_03_bin_104_scaffold_5553_3
CG_Pacearch_06, Pacearchaeota, Archaea

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2907..3362
-----------------
DNA (456bp)
protein (152aa)
Tax=CG_Pacearch_06
AB_03_bin_104_scaffold_5553_4
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(3368..4276)
-----------------
DNA (909bp)
protein (303aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
Ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGI7_9EURY
AB_03_bin_104_scaffold_5553_5

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comp(4371..4604)
-----------------
DNA (234bp)
protein (78aa)
hypothetical protein id=18248060 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein {ECO:0000313|EMBL:KHO48063.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
hypothetical protein
AB_03_bin_104_scaffold_5553_6
Thermococcus nautili, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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4795..5379
-----------------
DNA (585bp)
protein (195aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000372E4A9
Nitroreductase
Nitroreductase {ECO:0000313|EMBL:AHL23478.1}; TaxID=195522 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus nautili.;"
AB_03_bin_104_scaffold_5553_7
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(5376..6785)
-----------------
DNA (1410bp)
protein (470aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-) id=18313854 bin=Nanosalina tax=Nanosalina
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
AB_03_bin_104_scaffold_5553_8
AR4, Woesearchaeaota, DPANN, Archaea

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comp(7011..7313)
-----------------
DNA (303bp)
protein (101aa)
50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 id=5045961 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L12
Tax=AR4
AB_03_bin_104_scaffold_5553_9
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(7344..8303)
-----------------
DNA (960bp)
protein (320aa)
50S ribosomal protein L10 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXB6_METFV
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
AB_03_bin_104_scaffold_5553_10
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(8313..8945)
-----------------
DNA (633bp)
protein (211aa)
50S ribosomal protein L1 n=2 Tax=Pyrococcus furiosus RepID=RL1_PYRFU
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; TaxID=1185654 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus COM1.;"
AB_03_bin_104_scaffold_5553_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(8957..9679)
-----------------
DNA (723bp)
protein (241aa)
rpl11p; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5046603 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ribosomal protein L11P Rpl11p
Tax=CG_Woesearch_02
AB_03_bin_104_scaffold_5553_12

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comp(9690..10130)
-----------------
DNA (441bp)
protein (147aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=18248713 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Transcriptional antiterminator NusG {ECO:0000313|EMBL:KHO47548.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
nusG; transcription antitermination protein NusG
AB_03_bin_104_scaffold_5553_13
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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comp(10144..10323)
-----------------
DNA (180bp)
protein (60aa)
Preprotein translocase subunit secE; K07342 protein transport protein SEC61 subunit gamma and related proteins id=18315224 bin=Nanosalinarum tax=Nanosalinarum
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
secE; protein transport protein SEC61 gamma subunit homolog
AB_03_bin_104_scaffold_5553_14
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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10509..11495
-----------------
DNA (987bp)
protein (329aa)
tRNA pseudouridine synthase b (EC:4.2.1.70)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01081}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
Probable tRNA pseudouridine synthase B n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE8_METFV
AB_03_bin_104_scaffold_5553_15
unknown

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11499..11627
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

Displaying 15 items

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