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AB_03_bin_104_scaffold_20738

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_03_bin_104_scaffold_20738_1
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(1..216)
-----------------
DNA (216bp)
protein (72aa)
50S ribosomal protein L18e n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AGB2_PYRYC
50S ribosomal protein L18e
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=529709 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus yayanosii (strain CH1 / JCM 16557).;"
AB_03_bin_104_scaffold_20738_2
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(405..1163)
-----------------
DNA (759bp)
protein (253aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003621DCB
DNA-directed RNA polymerase subunit D
Tax=CG_Woesearch_01
AB_03_bin_104_scaffold_20738_3
Thermococcus nautili, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(1166..1603)
-----------------
DNA (438bp)
protein (146aa)
30S ribosomal protein S11 n=1 Tax=Thermococcus zilligii RepID=UPI000299D2B8
rps11p; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=195522 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus nautili.;"
AB_03_bin_104_scaffold_20738_4
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1608..2327)
-----------------
DNA (720bp)
protein (240aa)
30S ribosomal protein S4 n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=RS4_UNCMA
rps4p; 30S ribosomal protein S4P
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
AB_03_bin_104_scaffold_20738_5
Thermococcus sp. 4557, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(2344..2817)
-----------------
DNA (474bp)
protein (158aa)
30S ribosomal protein S13 n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HIR6_THES4
rps13p; 30S ribosomal protein S13P
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1042877 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. (strain CGMCC 1.5172 / 4557).;"
AB_03_bin_104_scaffold_20738_6

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2856..5135
-----------------
DNA (2280bp)
protein (760aa)
Putative carbamoyltransferase HypF {ECO:0000313|EMBL:CEG13813.1}; EC=2.1.3.- {ECO:0000313|EMBL:CEG13813.1};; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
mvu:Metvu_1555 (NiFe) hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF id=95778 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
(NiFe) hydrogenase maturation protein HypF
AB_03_bin_104_scaffold_20738_7
AR20, Woesearchaeaota, DPANN, Archaea

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5184..5573
-----------------
DNA (390bp)
protein (130aa)
Zn-ribbon containing protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEK5_METFS id=5103012 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Zn-ribbon containing protein
Tax=AR20
AB_03_bin_104_scaffold_20738_8
unknown

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5639..5866
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

AB_03_bin_104_scaffold_20738_9

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comp(6009..6374)
-----------------
DNA (366bp)
protein (122aa)
seg id=5800622 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61953.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Displaying 9 items

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