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AB_1215_Bin_111.fna_scaffold_5258

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_111.fna_scaffold_5258_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

340..1095
DNA (756bp) protein (252aa)
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

1061..1675
DNA (615bp) protein (205aa)
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

1679..2098
DNA (420bp) protein (140aa)
hypothetical protein
NUDIX hydrolase domain id=5240841 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2095..2688
DNA (594bp) protein (198aa)
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


2894..3493
DNA (600bp) protein (200aa)
30S ribosomal protein S7 id=5799588 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S7
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_6
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

3553..4275
DNA (723bp) protein (241aa)
dTMP kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] id=5044054 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
tmk; Thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000313|EMBL:KKW15668.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
AB_1215_Bin_111.fna_scaffold_5258_7
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(4277..5026)
DNA (750bp) protein (250aa)
anaerobic ribonucleoside-triphosphate reductase activating protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] id=5043715 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
anaerobic ribonucleoside-triphosphate reductase activating protein
Tax=CG_Woesearch_01
AB_1215_Bin_111.fna_scaffold_5258_8
unknown

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comp(5035..5142)
DNA (108bp) protein (36aa)

This feature has no annotations

AB_1215_Bin_111.fna_scaffold_5258_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(5157..5606)
DNA (450bp) protein (150aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHH4_9CLOT
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(5878..6375)
DNA (498bp) protein (166aa)
id=5800315 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

6455..7414
DNA (960bp) protein (320aa)
Wyosine base formation family n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IG85_ACIB4
wyosine biosynthesis protein TYW1
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7463..7729
DNA (267bp) protein (89aa)
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7860..8669
DNA (810bp) protein (270aa)
id=5042250 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8710..9894
DNA (1185bp) protein (395aa)
NhaP-type Na+(K+)/H+ antiporter n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WKE2_9EURY
potassium transporter CPA
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

9891..10682
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CCE42
xylose isomerase domain protein TIM barrel
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

10663..11064
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FD838
nucleotide binding protein PINc
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


11081..11671
DNA (591bp) protein (197aa)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11674..11859
DNA (186bp) protein (62aa)
DNA-directed RNA polymerase subunit E RpoE2; K03050 DNA-directed RNA polymerase subunit E" [EC:2.7.7.6] id=5049720 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase, subunit E
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11865..12416
DNA (552bp) protein (184aa)
Ribosomal protein S24E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T9G0_9EURY
hypothetical protein
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

12443..12640
DNA (198bp) protein (66aa)
30S ribosomal protein S27ae n=2 Tax=Euryarchaeota RepID=M9SBL1_9EURY
SSU ribosomal protein S27Ae
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(12686..13582)
DNA (897bp) protein (299aa)
Uncharacterized protein (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV32_9EURY
hypothetical protein
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(13617..13928)
DNA (312bp) protein (104aa)
50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 id=5045961 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L12
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(13953..15092)
DNA (1140bp) protein (380aa)
50S ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY
acidic ribosomal protein P0 RplPO
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(15093..15746)
DNA (654bp) protein (218aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5047524 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L1
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_25
unknown

Not on your lists

15941..16843
DNA (903bp) protein (301aa)

This feature has no annotations

AB_1215_Bin_111.fna_scaffold_5258_26
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16846..17508)
DNA (663bp) protein (221aa)
transglutaminase domain-containing protein id=5044916 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_27
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(17498..18463)
DNA (966bp) protein (322aa)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog id=5800645 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-binding/iron metalloprotein/AP endonuclease, tRNA threonylcarbamoyladenosine biosynthesis protein
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_28
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(18547..19674)
DNA (1128bp) protein (376aa)
Tax=CG_Woesearch_02
AB_1215_Bin_111.fna_scaffold_5258_29
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19851..20966)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZUS5_DESOH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW66488.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
Displaying 29 items

View Taxonomy