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AB_1215_Bin_116.fna_scaffold_1661

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_116.fna_scaffold_1661_1
unknown

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1..336
DNA (336bp) protein (112aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_1661_2
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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501..1787
DNA (1287bp) protein (429aa)
Glutamate synthase [NADPH] small chain {ECO:0000313|EMBL:AKB15237.1}; EC=1.4.1.13 {ECO:0000313|EMBL:AKB15237.1};; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila CHTI-55.;"
Glutamate synthase [NADPH] small chain (EC:1.4.1.13)
Glutamate synthase (NADPH) n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJJ7_METAC
AB_1215_Bin_116.fna_scaffold_1661_3
CG_Micra_02, Micraarchaeota, Archaea

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1806..3098
DNA (1293bp) protein (431aa)
hydroxymethylglutaryl-CoA reductase (EC:1.1.1.88)
hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.88); K00054 hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] id=5241518 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Micra_02
AB_1215_Bin_116.fna_scaffold_1661_4
AR10, Diapherotrites, DPANN, Archaea

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3104..4156
DNA (1053bp) protein (351aa)
hydroxymethylglutaryl-CoA synthase
hydroxymethylglutaryl-CoA synthase id=5241519 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_1661_5
AR10, Diapherotrites, DPANN, Archaea

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4200..5372
DNA (1173bp) protein (391aa)
acetyl-CoA C-acetyltransferase (EC:2.3.1.9)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] id=5241521 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_1661_6
AR10, Diapherotrites, DPANN, Archaea

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5369..5770
DNA (402bp) protein (134aa)
hypothetical protein
hypothetical protein; K07068 id=5241522 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_1661_7
unknown

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5786..7117
DNA (1332bp) protein (444aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_1661_8
AR10, Diapherotrites, DPANN, Archaea

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7162..8100
DNA (939bp) protein (313aa)
hypothetical protein; K00869 mevalonate kinase [EC:2.7.1.36] id=5241526 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
Tax=AR10
AB_1215_Bin_116.fna_scaffold_1661_9
CG_Micra_01, Micraarchaeota, Archaea

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8097..8651
DNA (555bp) protein (185aa)
ubiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase UbiX (EC:4.1.1.-)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=G6I6Z7_9FIRM id=1242042 bin=RBG2 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi
Tax=CG_Micra_01
AB_1215_Bin_116.fna_scaffold_1661_10

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8648..9943
DNA (1296bp) protein (432aa)
UbiD family decarboxylase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TYQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKN41149.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
AB_1215_Bin_116.fna_scaffold_1661_11

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9948..10724
DNA (777bp) protein (259aa)
Marine sediment metagenome DNA, contig: S01H4_C02065 {ECO:0000313|EMBL:GAG55979.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AB_1215_Bin_116.fna_scaffold_1661_12
CG_Micra_01, Micraarchaeota, Archaea

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10721..11896
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D6I3_METSW
hypothetical protein
Tax=CG_Micra_01
AB_1215_Bin_116.fna_scaffold_1661_13

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11893..12282
DNA (390bp) protein (130aa)
UPF0107 protein TK1248 n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Y1248_THEKO
Uncharacterized protein {ECO:0000313|EMBL:KKN20589.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
AB_1215_Bin_116.fna_scaffold_1661_14

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12291..13091
DNA (801bp) protein (267aa)
Isopentenyl phosphate kinase n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TBB9_METSL
Marine sediment metagenome DNA, contig: S01H1_S08221 {ECO:0000313|EMBL:GAG06400.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
aspartate/glutamate/uridylate kinase
AB_1215_Bin_116.fna_scaffold_1661_15
Auxenochlorella protothecoides, Auxenochlorella, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

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13096..13614
DNA (519bp) protein (173aa)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6IXI1_9BACT
Isopentenyl-diphosphate Delta-isomerase {ECO:0000313|EMBL:KFM26292.1}; TaxID=3075 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella.;" source="Auxenochlorella protothecoides (Green microalga) (Chlorella; protothecoides).;"
dimethyladenosine transferase
AB_1215_Bin_116.fna_scaffold_1661_16
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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13661..14683
DNA (1023bp) protein (341aa)
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZG3_METFV
AB_1215_Bin_116.fna_scaffold_1661_17
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(14680..15447)
DNA (768bp) protein (256aa)
D-tyrosyl-tRNA(Tyr) deacylase id=4541657 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
AB_1215_Bin_116.fna_scaffold_1661_18
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(15501..15824)
DNA (324bp) protein (108aa)
id=4744551 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
AB_1215_Bin_116.fna_scaffold_1661_19
unknown

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comp(15831..16052)
DNA (222bp) protein (74aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_1661_20
RIFOXYC1_FULL_Bdellovibrionales_37_79_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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16179..17639
DNA (1461bp) protein (487aa)
Glucosamine-6-phosphate deaminase n=3 Tax=Thermoanaerobacter RepID=G2MSW4_9THEO
glucosamine-6-phosphate deaminase
Tax=RIFOXYC1_FULL_Bdellovibrionales_37_79_curated
AB_1215_Bin_116.fna_scaffold_1661_21
AR10, Diapherotrites, DPANN, Archaea

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comp(17642..18115)
DNA (474bp) protein (158aa)
hypothetical protein
Putative uncharacterized protein id=5241532 bin=GW2011_AR10_complete species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_1661_22
AR10, Diapherotrites, DPANN, Archaea

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18262..18618
DNA (357bp) protein (119aa)
hypothetical protein
seg id=5241533 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_1661_23

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comp(18620..21427)
DNA (2808bp) protein (936aa)
transmembrane_regions id=5241494 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60485.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
hypothetical protein
AB_1215_Bin_116.fna_scaffold_1661_24
unknown

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21681..21803
DNA (123bp) protein (41aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_1661_25
unknown

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21769..22068
DNA (300bp) protein (100aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_1661_26
unknown

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comp(22110..22922)
DNA (813bp) protein (271aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_1661_27
unknown

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comp(23019..23927)
DNA (909bp) protein (303aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_1661_28
unknown

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24018..24674
DNA (657bp) protein (219aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_1661_29
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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24840..25157
DNA (318bp) protein (106aa)
Phosphodiesterase MJ0936 family n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LIU8_THEPS
phosphodiesterase MJ0936 family
Tax=RBG_13_Bathyarchaeota_38_9_curated
Displaying 29 items

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