ggKbase home page

AB_1215_Bin_116.fna_scaffold_3756

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_116.fna_scaffold_3756_1
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(76..1857)
DNA (1782bp) protein (594aa)
sodium/hydrogen exchanger
sodium/hydrogen exchanger id=5240934 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_3756_2
unknown

Not on your lists

comp(1937..2836)
DNA (900bp) protein (300aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_3756_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(2833..4224)
DNA (1392bp) protein (464aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
cysS; Cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] id=5240936 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Woesearch_02
AB_1215_Bin_116.fna_scaffold_3756_4
unknown

Not on your lists

comp(4291..5205)
DNA (915bp) protein (305aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_3756_5

Not on your lists

comp(5279..6646)
DNA (1368bp) protein (456aa)
adenylosuccinate lyase (EC:4.3.2.2)
fumarate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] id=5240832 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Adenylosuccinate lyase {ECO:0000313|EMBL:AJF59824.1}; EC=4.3.2.2 {ECO:0000313|EMBL:AJF59824.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_3756_6

Not on your lists

comp(6643..7641)
DNA (999bp) protein (333aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] id=5240828 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000313|EMBL:AJF59820.1}; EC=6.3.2.6 {ECO:0000313|EMBL:AJF59820.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_3756_7

Not on your lists

comp(7641..8366)
DNA (726bp) protein (242aa)
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21 5.4.99.18)
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] id=5240827 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_3756_8
GWA2_Deltaproteobacteria_55_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8431..9636
DNA (1206bp) protein (402aa)
FolC bifunctional protein id=1708117 bin=GWB2_Proteobacteria_55_19 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
Tax=GWA2_Deltaproteobacteria_55_10_curated
AB_1215_Bin_116.fna_scaffold_3756_9
CG_CPR14_01, CG_CPR14, Bacteria

Not on your lists

9699..10385
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B0D2_9BACT
hypothetical protein
Tax=CG_CPR14_01
AB_1215_Bin_116.fna_scaffold_3756_10
unknown

Not on your lists

10425..10817
DNA (393bp) protein (131aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_3756_11
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

10895..12154
DNA (1260bp) protein (420aa)
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1) id=5240824 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_3756_12

Not on your lists

12159..13007
DNA (849bp) protein (283aa)
5,10-methylene-tetrahydrofolate dehydrogenase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD id=2823241 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
Bifunctional protein FolD {ECO:0000313|EMBL:KKW24920.1}; TaxID=1620413 species="Bacteria.;" source="bacterium GW2011_GWC1_52_13.;"
AB_1215_Bin_116.fna_scaffold_3756_13
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

comp(13011..13277)
DNA (267bp) protein (89aa)
Glutaredoxin-like protein, YruB-family n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LSR8_CLOCD
Glutaredoxin-like protein, YruB-family
Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
AB_1215_Bin_116.fna_scaffold_3756_14
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

13343..13960
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036298B0
hypothetical protein
Tax=AR10
AB_1215_Bin_116.fna_scaffold_3756_15
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

14030..15325
DNA (1296bp) protein (432aa)
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZM05_THELI
phosphoribosylglycinamide formyltransferase
Tax=CG_Woesearch_01
AB_1215_Bin_116.fna_scaffold_3756_16

Not on your lists

15335..16885
DNA (1551bp) protein (517aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase (EC:3.5.4.10 2.1.2.3)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] id=5240821 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase {ECO:0000313|EMBL:AJF59813.1}; EC=2.1.2.3 {ECO:0000313|EMBL:AJF59813.1};; EC=3.5.4.10 {ECO:0000313|EMBL:AJF59813.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_3756_17
unknown

Not on your lists

16917..17372
DNA (456bp) protein (152aa)

This feature has no annotations

Displaying 17 items

View Taxonomy