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AB_1215_Bin_116.fna_scaffold_5519

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_116.fna_scaffold_5519_1
unknown

Not on your lists

2..67
DNA (66bp) protein (22aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_5519_2

Not on your lists

373..981
DNA (609bp) protein (203aa)
deoxyribonuclease/rho motif-related TRAM
deoxyribonuclease/rho motif-related TRAM id=5241628 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Deoxyribonuclease/rho motif-related TRAM {ECO:0000313|EMBL:AJF60619.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_5519_3
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

1299..1940
DNA (642bp) protein (214aa)
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=2162 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum.;"
Endonuclease III n=2 Tax=Methanothermobacter thermautotrophicus RepID=O26858_METTH
AB_1215_Bin_116.fna_scaffold_5519_4
unknown

Not on your lists

1966..2247
DNA (282bp) protein (94aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_5519_5
GWF2_OD1_40_10, Parcubacteria, Bacteria

Not on your lists

2280..2660
DNA (381bp) protein (127aa)
metallopeptidase
metallopeptidase id=5241554 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Metallopeptidase {ECO:0000313|EMBL:KKR36707.1}; TaxID=1618964 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_40_10.;"
AB_1215_Bin_116.fna_scaffold_5519_6

Not on your lists

comp(2701..2991)
DNA (291bp) protein (97aa)
replication factor A1
single-stranded DNA-binding protein; K07466 replication factor A1 id=5241180 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Replication factor A1 {ECO:0000313|EMBL:AJF60171.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_5519_7
Bacteroides pectinophilus CAG:437, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3724..4650
DNA (927bp) protein (309aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1263051 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides pectinophilus CAG:437.;"
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036614FA
TIM-barrel protein, nifR3 family
AB_1215_Bin_116.fna_scaffold_5519_8

Not on your lists

4793..8896
DNA (4104bp) protein (1368aa)
hypothetical protein
transmembrane_regions id=5241600 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60591.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_5519_9
unknown

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8917..9132
DNA (216bp) protein (72aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_5519_10
AR10, Diapherotrites, DPANN, Archaea

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9180..9602
DNA (423bp) protein (141aa)
hypothetical protein
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein id=5241001 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_5519_11
unknown

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comp(9613..10134)
DNA (522bp) protein (174aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_5519_12

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comp(10170..10391)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TKJ9_METAC
hypothetical protein
Marine sediment metagenome DNA, contig: S03H2_C02680 {ECO:0000313|EMBL:GAH30426.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AB_1215_Bin_116.fna_scaffold_5519_13
unknown

Not on your lists

10552..10968
DNA (417bp) protein (139aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_5519_14
Trypanosoma cruzi, Trypanosoma, Kinetoplastida, Eukaryota

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10961..12649
DNA (1689bp) protein (563aa)
Trans-sialidase, putative n=1 Tax=Trypanosoma cruzi (strain CL Brener) RepID=Q4E0H9_TRYCC
Trans-sialidase, putative {ECO:0000313|EMBL:EAN98284.1}; TaxID=353153 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma; Schizotrypanum.;" source="Trypanosoma cruzi (strain CL Brener).;"
histone H1 family protein nucleoprotein HC2
AB_1215_Bin_116.fna_scaffold_5519_15

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comp(12677..13177)
DNA (501bp) protein (167aa)
nuclease SNase-like
nuclease (SNase-like) id=5240568 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Nuclease SNase-like {ECO:0000313|EMBL:AJF59561.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_5519_16
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13445..13897
DNA (453bp) protein (151aa)
Flavodoxin n=3 Tax=Clostridium acetobutylicum RepID=F0K3L3_CLOAE
flavodoxin
Flavodoxin {ECO:0000313|EMBL:AAK78185.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
AB_1215_Bin_116.fna_scaffold_5519_17
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13943..14206
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FR58_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD39797.1}; TaxID=323259 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
AB_1215_Bin_116.fna_scaffold_5519_18
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14269..14712)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TDM4_HELMI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ85549.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
AB_1215_Bin_116.fna_scaffold_5519_19
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14714..15133)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00036B37D5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGB40485.1}; Flags: Precursor;; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1).;"
AB_1215_Bin_116.fna_scaffold_5519_20
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

15481..15660
DNA (180bp) protein (60aa)
Uncharacterized protein (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TY35_9EURY
hypothetical protein
Tax=RBG_13_Euryarchaeota_31_8_curated
AB_1215_Bin_116.fna_scaffold_5519_21
unknown

Not on your lists

15863..16333
DNA (471bp) protein (157aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_5519_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16341..17096)
DNA (756bp) protein (252aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFH2_9EURY
ABC efflux pump, inner membrane subunit
Tax=CG_Woesearch_02
AB_1215_Bin_116.fna_scaffold_5519_23
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(17128..18132)
DNA (1005bp) protein (335aa)
Daunorubicin resistance ABC transporter ATP-binding subunit n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZC6_METHD
daunorubicin resistance ABC transporter ATP-binding subunit
Tax=CG_Micra_04
AB_1215_Bin_116.fna_scaffold_5519_24
GWB1_OD1_40_7, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18229..18612
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FT78_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR69722.1}; TaxID=1618744 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_7.;"
AB_1215_Bin_116.fna_scaffold_5519_25
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(18632..18883)
DNA (252bp) protein (84aa)
DNA topoisomerase i (EC:5.99.1.2)
Topoisomerase DNA binding C4 zinc finger n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QHA0_9EURY
Topoisomerase DNA binding C4 zinc finger {ECO:0000313|EMBL:EGQ43671.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
AB_1215_Bin_116.fna_scaffold_5519_26
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19046..19435)
DNA (390bp) protein (130aa)
GPR1/FUN34/yaaH family protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZH6_9EURY
GPR1/FUN34/yaaH family protein {ECO:0000313|EMBL:EHQ36085.1}; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
hypothetical protein
AB_1215_Bin_116.fna_scaffold_5519_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19572..19847
DNA (276bp) protein (92aa)
GIY-YIG catalytic domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SIV2_CLOSY
UPF0246 protein HMPREF1020_03156 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Predicted endonuclease containing a URI domain
AB_1215_Bin_116.fna_scaffold_5519_28
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

19868..20263
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037711B6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX01194.1}; TaxID=444158 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus maripaludis (strain C6 / ATCC BAA-1332).;"
AB_1215_Bin_116.fna_scaffold_5519_29
unknown

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20491..20817
DNA (327bp) protein (109aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_5519_30
CG_CPR01_01, CG_CPR01, Bacteria

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21170..21922
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6ETY1_9BACT
O-methyltransferase-like protein
Tax=CG_CPR01_01
Displaying items 1-30 of 36 in total

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