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AB_1215_Bin_116.fna_scaffold_14039

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_116.fna_scaffold_14039_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2..217
DNA (216bp) protein (72aa)
Putative translation factor SUI1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL49_NITGG
translation factor SUI1
Protein translation factor SUI1 homolog {ECO:0000256|PIRNR:PIRNR037511}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
AB_1215_Bin_116.fna_scaffold_14039_2
AR10, Diapherotrites, DPANN, Archaea

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210..512
DNA (303bp) protein (101aa)
ribonuclease P protein subunit POP4 (EC:3.1.26.5)
ribonuclease P, Rpp29; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] id=5241359 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_14039_3

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505..1056
DNA (552bp) protein (184aa)
30S ribosomal protein S17P n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BD91_METIK
Small subunit ribosomal protein S17 {ECO:0000313|EMBL:KHO55762.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
30S ribosomal protein S17
AB_1215_Bin_116.fna_scaffold_14039_4

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1073..1471
DNA (399bp) protein (133aa)
50S ribosomal protein L14, large subunit ribosomal protein L14
rpl14p; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5241361 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
AB_1215_Bin_116.fna_scaffold_14039_5

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1482..1964
DNA (483bp) protein (161aa)
large subunit ribosomal protein L24
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=5241362 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Large subunit ribosomal protein L24 {ECO:0000313|EMBL:AJF60353.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_14039_6
AR10, Diapherotrites, DPANN, Archaea

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1969..2685
DNA (717bp) protein (239aa)
small subunit ribosomal protein S4e
30S ribosomal protein S4; K02987 small subunit ribosomal protein S4e id=5241363 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_14039_7

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2692..3207
DNA (516bp) protein (172aa)
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L5
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5241364 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_1215_Bin_116.fna_scaffold_14039_8
Pyrobaculum sp. 1860, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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3204..3362
DNA (159bp) protein (53aa)
30S ribosomal protein S14 type Z n=1 Tax=Pyrobaculum sp. 1860 RepID=G7VGB0_9CREN
30S ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1104324 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum sp. 1860.;"
AB_1215_Bin_116.fna_scaffold_14039_9

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3373..3765
DNA (393bp) protein (131aa)
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
30S ribosomal protein S8, small subunit ribosomal protein S8
rps8p; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=5241366 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_1215_Bin_116.fna_scaffold_14039_10
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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3778..4338
DNA (561bp) protein (187aa)
50S ribosomal protein L6 n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DU94_METV3
50S ribosomal protein L6P
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus voltae (strain ATCC BAA-1334 / A3).;"
AB_1215_Bin_116.fna_scaffold_14039_11

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4340..5053
DNA (714bp) protein (238aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55770.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L32e
50S ribosomal protein L32e; K02912 large subunit ribosomal protein L32e id=5241368 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_1215_Bin_116.fna_scaffold_14039_12

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5058..5507
DNA (450bp) protein (150aa)
50S ribosomal protein L19e, large subunit ribosomal protein L19e
rpl19e; 50S ribosomal protein L19e; K02885 large subunit ribosomal protein L19e id=5241369 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L19e, large subunit ribosomal protein L19e {ECO:0000313|EMBL:AJF60360.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_14039_13
AR10, Diapherotrites, DPANN, Archaea

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5509..6045
DNA (537bp) protein (179aa)
large subunit ribosomal protein L18
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 id=5241370 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_14039_14

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6038..6733
DNA (696bp) protein (232aa)
30S ribosomal protein S5, small subunit ribosomal protein S5
rps5p; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=5241371 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S5, small subunit ribosomal protein S5 {ECO:0000313|EMBL:AJF60362.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_14039_15

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6740..7195
DNA (456bp) protein (152aa)
50S ribosomal protein L30P, large subunit ribosomal protein L30
rpl30p; 50S ribosomal protein L30P; K02907 large subunit ribosomal protein L30 id=5241372 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_14039_16

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7197..7739
DNA (543bp) protein (181aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15, large subunit ribosomal protein L15
rpl15p; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 id=5241373 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_1215_Bin_116.fna_scaffold_14039_17

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7759..8937
DNA (1179bp) protein (393aa)
preprotein translocase subunit SecY
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5241374 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Displaying 17 items

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