ggKbase home page

AB_1215_Bin_116.fna_scaffold_17762

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_116.fna_scaffold_17762_1
unknown

Not on your lists

2..166
DNA (165bp) protein (55aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_17762_2
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(163..858)
DNA (696bp) protein (232aa)
hypothetical protein
hypothetical protein; K07562 nonsense-mediated mRNA decay protein 3 id=5240542 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_17762_3
unknown

Not on your lists

comp(863..1690)
DNA (828bp) protein (276aa)
hypothetical protein
AB_1215_Bin_116.fna_scaffold_17762_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(1687..2970)
DNA (1284bp) protein (428aa)
hypothetical protein
beta-lactamase domain-containing protein; K07577 putative mRNA 3-end processing factor id=5240540 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_17762_5
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2997..3182)
DNA (186bp) protein (62aa)
4 Fe-4S ferredoxin n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LUU5_THEPS
4 Fe-4S ferredoxin
Tax=S_Thermacetogenium_phaeum_55_64
AB_1215_Bin_116.fna_scaffold_17762_6
CG_Wirth_01, Wirthbacteria, Bacteria

Not on your lists

comp(3198..3413)
DNA (216bp) protein (72aa)
Iron-sulfur cluster assembly accessory protein n=2 Tax=Waddlia chondrophila RepID=D6YW49_WADCW id=5103548 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Iron-sulfur cluster assembly accessory protein
Tax=CG_Wirth_01
AB_1215_Bin_116.fna_scaffold_17762_7
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(3441..4166)
DNA (726bp) protein (242aa)
Anaerobic ribonucleoside-triphosphate reductase activating protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EJ76_9FIRM
ribonucleoside-triphosphate reductase-like protein
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_1215_Bin_116.fna_scaffold_17762_8
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(4157..4303)
DNA (147bp) protein (49aa)
nrdD; anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Oxygen-sensitive ribonucleoside-triphosphate reductase id=4060580 bin=GWC2_OP3-like_45_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
AB_1215_Bin_116.fna_scaffold_17762_9
RLO_OD1_Falkowbacteria_45_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4278..9080)
DNA (4803bp) protein (1601aa)
chd:Calhy_2106 anaerobic ribonucleoside-triphosphate reductase; K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2] id=95921 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_45_13_curated
AB_1215_Bin_116.fna_scaffold_17762_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

9630..10016
DNA (387bp) protein (129aa)
hypothetical protein
seg id=5240624 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_17762_11

Not on your lists

comp(10340..10573)
DNA (234bp) protein (78aa)
Marine sediment metagenome DNA, contig: S12H4_S02227 {ECO:0000313|EMBL:GAI93152.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Glutaredoxin-like protein, YruB-family id=2698725 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
glutaredoxin-like protein, YruB-family
AB_1215_Bin_116.fna_scaffold_17762_12
RBG_13_RIF_OD1_07_38_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(10594..11748)
DNA (1155bp) protein (385aa)
hypothetical protein id=84633 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Tax=RBG_13_RIF_OD1_07_38_11_curated
Displaying 12 items

View Taxonomy