ggKbase home page

AB_1215_Bin_116.fna_scaffold_24821

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_116.fna_scaffold_24821_1
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..456)
DNA (456bp) protein (152aa)
Collagen adhesin domain protein n=3 Tax=Bacillus cereus RepID=B7HXN6_BACC7
Collagen adhesin domain protein {ECO:0000313|EMBL:ACJ80373.1}; TaxID=405534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus (strain AH187).;"
Zinc finger-domain-containing protein
AB_1215_Bin_116.fna_scaffold_24821_2

Not on your lists

comp(458..922)
DNA (465bp) protein (155aa)
prefoldin alpha subunit
prefoldin subunit alpha; K04797 prefoldin alpha subunit id=5241630 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_24821_3
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(903..1112)
DNA (210bp) protein (70aa)
hypothetical protein
Ribosomal protein L18a/LX id=5241631 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_24821_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(1119..1778)
DNA (660bp) protein (220aa)
translation initiation factor 6
translation initiation factor IF-6; K03264 translation initiation factor 6 id=5241632 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_24821_5
Methanosphaera stadtmanae, Methanosphaera, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1775..2230)
DNA (456bp) protein (152aa)
50S ribosomal protein L31e n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NGQ8_METST
rpl31e; 50S ribosomal protein L31
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=339860 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanosphaera.;" source="Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 /; MCB-3).;"
AB_1215_Bin_116.fna_scaffold_24821_6
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(2265..2486)
DNA (222bp) protein (74aa)
hypothetical protein
Ribosomal protein L39e id=5241634 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_24821_7

Not on your lists

comp(2493..2786)
DNA (294bp) protein (98aa)
hypothetical protein
hypothetical protein; K06875 programmed cell death protein 5 id=5241635 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60626.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_24821_8
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


comp(2817..3422)
DNA (606bp) protein (202aa)
30S ribosomal protein S19e, small subunit ribosomal protein S19e
rps19e; 30S ribosomal protein S19e; K02966 small subunit ribosomal protein S19e id=5241636 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_24821_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(3542..3865)
DNA (324bp) protein (108aa)
ribonuclease P protein subunit RPR2 (EC:3.1.26.5)
ribonuclease P subunit RPR2; K03540 ribonuclease P protein subunit RPR2 [EC:3.1.26.5] id=5241639 bin=GW2011_AR10_complete species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_24821_10

Not on your lists

comp(3912..5972)
DNA (2061bp) protein (687aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI000375D5F6
Uncharacterized protein {ECO:0000313|EMBL:KKM72349.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
probable cell surface glycoprotein
AB_1215_Bin_116.fna_scaffold_24821_trna_1
unknown

Not on your lists

comp(6048..6119)
DNA (72bp)
transferRNA Gly
AB_1215_Bin_116.fna_scaffold_24821_11
GWC2_OP11_41_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

6194..6595
DNA (402bp) protein (134aa)
thymidylate kinase n=1 Tax=Marinobacterium stanieri RepID=UPI000255A3B1
Thymidylate kinase {ECO:0000313|EMBL:KKS21210.1}; TaxID=1618487 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_41_7.;"
thymidylate kinase
Displaying 12 items

View Taxonomy