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AB_1215_Bin_116.fna_scaffold_30391

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_116.fna_scaffold_30391_1
unknown

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3..761
DNA (759bp) protein (253aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_30391_2

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906..1511
DNA (606bp) protein (202aa)
Large subunit ribosomal protein L15e {ECO:0000313|EMBL:KHO55699.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
50S ribosomal protein L15e, large subunit ribosomal protein L15e
rpl15e; 50S ribosomal protein L15e; K02877 large subunit ribosomal protein L15e id=5241836 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_1215_Bin_116.fna_scaffold_30391_3
unknown

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comp(1557..3731)
DNA (2175bp) protein (725aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_30391_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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3792..4790
DNA (999bp) protein (333aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=2 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z7B5_9BACT id=1241926 bin=RBG2 species=Dethiosulfovibrio peptidovorans genus=Dethiosulfovibrio taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=RBG2 organism_group=Chloroflexi
Fe-S center protein
Tax=RBG_13_Bathyarchaeota_38_9_curated
AB_1215_Bin_116.fna_scaffold_30391_5
AR10, Diapherotrites, DPANN, Archaea

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4790..5326
DNA (537bp) protein (179aa)
metal dependent phosphohydrolase
metal dependent phosphohydrolase id=5241838 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_30391_6
unknown

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5323..5703
DNA (381bp) protein (127aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_30391_7

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5802..5966
DNA (165bp) protein (55aa)
Proteasome alpha subunit {ECO:0000313|EMBL:KHO55693.1}; EC=3.4.25.1 {ECO:0000313|EMBL:KHO55693.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
psmA; proteasome alpha subunit (EC:3.4.25.1)
psmA; proteasome, subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5241841 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_1215_Bin_116.fna_scaffold_30391_8
Parcubacteria bacterium GW2011_GWB1_45_7, Parcubacteria, Bacteria

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6092..6517
DNA (426bp) protein (142aa)
psmA; proteasome alpha subunit (EC:3.4.25.1)
psmA; proteasome, subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5241841 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Proteasome subunit alpha {ECO:0000313|EMBL:KKU11178.1}; Flags: Fragment;; TaxID=1618878 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_45_7.;"
AB_1215_Bin_116.fna_scaffold_30391_9

Not on your lists


6538..7233
DNA (696bp) protein (232aa)
ribosome maturation protein SDO1
ribosome maturation protein SBDS-like protein; K14574 ribosome maturation protein SDO1 id=5241842 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Ribosome maturation protein SDO1 {ECO:0000313|EMBL:AJF60833.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_30391_10

Not on your lists

7235..7888
DNA (654bp) protein (218aa)
Exosome complex component RRP4 {ECO:0000313|EMBL:KHO55691.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
exosome complex RNA-binding protein Rrp4
exosome complex RNA-binding protein Rrp4 id=5241843 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_1215_Bin_116.fna_scaffold_30391_11
AR10, Diapherotrites, DPANN, Archaea

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7892..8629
DNA (738bp) protein (246aa)
exosome complex component RRP41
exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 id=5241844 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_30391_12

Not on your lists

8635..9414
DNA (780bp) protein (260aa)
Exosome complex component RRP42 {ECO:0000313|EMBL:KHO55689.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
exosome complex component RRP42
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 id=5241845 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_1215_Bin_116.fna_scaffold_30391_13
AR10, Diapherotrites, DPANN, Archaea

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9429..9797
DNA (369bp) protein (123aa)
large subunit ribosomal protein L37Ae
50S ribosomal protein L37Ae; K02921 large subunit ribosomal protein L37Ae id=5241846 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_30391_14
unknown

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9794..9931
DNA (138bp) protein (46aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_30391_15
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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9903..10169
DNA (267bp) protein (89aa)
KEOPS complex Pcc1-like subunit n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RS10_METFO
KEOPS complex Pcc1-like subunit {ECO:0000313|EMBL:EKF85550.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum DSM 3637.;"
AB_1215_Bin_116.fna_scaffold_30391_16
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

10172..10531
DNA (360bp) protein (120aa)
prefoldin, chaperonin cofactor, prefoldin beta subunit
GimC; prefoldin, chaperonin cofactor; K04798 prefoldin beta subunit id=5241849 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_30391_17
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

10531..11109
DNA (579bp) protein (193aa)
phosphoesterase RecJ protein
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein id=5241850 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_30391_18
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

11073..11525
DNA (453bp) protein (151aa)
phosphoesterase RecJ protein
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein id=5241850 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_30391_19
unknown

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comp(11522..12169)
DNA (648bp) protein (216aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_30391_20
AR10, Diapherotrites, DPANN, Archaea

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comp(12212..12901)
DNA (690bp) protein (230aa)
hypothetical protein
HAD superfamily (subfamily IA) hydrolase, TIGR02253; K07025 putative hydrolase of the HAD superfamily id=5241563 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_30391_21
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(12898..13563)
DNA (666bp) protein (222aa)
Haloacid dehalogenase superfamily enzyme, subfamily IA n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U550_9CLOT
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:EID54796.1}; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
hydrolase
AB_1215_Bin_116.fna_scaffold_30391_22
unknown

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13617..13742
DNA (126bp) protein (42aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_30391_23
AR10, Diapherotrites, DPANN, Archaea

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comp(13891..14238)
DNA (348bp) protein (116aa)
hypothetical protein
Sigma-G inhibitor, Gin id=5241853 bin=GW2011_AR10_complete species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_30391_24

Not on your lists

comp(14253..14663)
DNA (411bp) protein (137aa)
hypothetical protein
seg id=5241855 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60846.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_30391_25

Not on your lists

comp(14691..15635)
DNA (945bp) protein (315aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55004.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
Polymerase/histidinol phosphatase-like id=5241857 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_1215_Bin_116.fna_scaffold_30391_26
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

15695..16387
DNA (693bp) protein (231aa)
hypothetical protein
Uncharacterized protein id=5241605 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_30391_27
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(16421..16543)
DNA (123bp) protein (41aa)
coiled-coil id=5799532 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_01
AB_1215_Bin_116.fna_scaffold_30391_28
unknown

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comp(16515..16604)
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 28 items

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