ggKbase home page

AB_1215_Bin_116.fna_scaffold_8004_11

Organism: AB_1215_Bin_116

near complete RP 32 / 55 MC: 4 BSCG 18 / 51 MC: 1 ASCG 37 / 38 MC: 2
Location: 4648..5061

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RL13_THEKO similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 142.0
  • Bit_score: 147
  • Evalue 8.80e-33
rpl13p; 50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 142.0
  • Bit_score: 147
  • Evalue 2.50e-33
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; TaxID=69014 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1); (Pyrococcus kodakaraensis (strain KOD1)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 142.0
  • Bit_score: 147
  • Evalue 1.20e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermococcus kodakarensis → Thermococcus → Thermococcales → Thermococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 414
ATGATTCTGATAAACGCTGAGAACCAGGTAATAGGAAGGCTTGCCACCTTTGTTGCAAAAAAGGCACTGCAAGGAGAAGAAGTAACCATAGTCAATGCCGAGAAGGCAATAATAACCGGCTCAAAAAAGGACGCAGTGCGAAAATACAGAAGCAAAATGGACATTAGGGGCAAGGGAAACCCCGAAAAAGGCCCAAAATTCAGCAGAATGCCGGACAGAGTTTTGAGAAGGTCCATAAGAGGAATGCTTCCCTGGAAAAGCAGCAGGGGCAGGGACGCATACAGAAAAGTTCACGCTTACATCGGCATACCAGAAGAATTTGAAGGAAAAGCATTTGCAGAACTGCCAGAAAGGCAGGTTAAAAAGTTTGTAGAGCTTGGCATTGTTTGCAAGCTGCTTGGAGCAAAGTGGTAA
PROTEIN sequence
Length: 138
MILINAENQVIGRLATFVAKKALQGEEVTIVNAEKAIITGSKKDAVRKYRSKMDIRGKGNPEKGPKFSRMPDRVLRRSIRGMLPWKSSRGRDAYRKVHAYIGIPEEFEGKAFAELPERQVKKFVELGIVCKLLGAKW*