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AB_1215_Bin_116.fna_scaffold_8004

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_116.fna_scaffold_8004_1
AR10, Diapherotrites, DPANN, Archaea

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2..244
DNA (243bp) protein (81aa)
preprotein translocase subunit SecY
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5241374 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_8004_2
unknown

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259..432
DNA (174bp) protein (58aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_8004_3
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

433..993
DNA (561bp) protein (187aa)
hypothetical protein
hypothetical protein id=5241375 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_8004_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

977..1309
DNA (333bp) protein (111aa)
large subunit ribosomal protein L34e
ribosomal protein L34e; K02915 large subunit ribosomal protein L34e id=5241376 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_8004_5
unknown

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1315..1539
DNA (225bp) protein (75aa)

This feature has no annotations

AB_1215_Bin_116.fna_scaffold_8004_6
AR10, Diapherotrites, DPANN, Archaea

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1550..2098
DNA (549bp) protein (183aa)
small subunit ribosomal protein S13
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=5241378 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_8004_7
AR10, Diapherotrites, DPANN, Archaea

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2111..2866
DNA (756bp) protein (252aa)
30S ribosomal protein S4, small subunit ribosomal protein S4
rps4p; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=5241379 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_8004_8

Not on your lists


2863..3246
DNA (384bp) protein (128aa)
small subunit ribosomal protein S11
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 id=5241380 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_8004_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

3334..4092
DNA (759bp) protein (253aa)
DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5241381 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_8004_trna_1
unknown

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4114..4234
DNA (121bp)
transferRNA Leu
AB_1215_Bin_116.fna_scaffold_8004_10
AR10, Diapherotrites, DPANN, Archaea

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4178..4651
DNA (474bp) protein (158aa)
50S ribosomal protein L18e, large subunit ribosomal protein L18e
rpl18E; 50S ribosomal protein L18e; K02883 large subunit ribosomal protein L18e id=5241382 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_8004_11
Thermococcus kodakarensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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4648..5061
DNA (414bp) protein (138aa)
50S ribosomal protein L13 n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RL13_THEKO
rpl13p; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; TaxID=69014 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1); (Pyrococcus kodakaraensis (strain KOD1)).;"
AB_1215_Bin_116.fna_scaffold_8004_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


5065..5496
DNA (432bp) protein (144aa)
small subunit ribosomal protein S9
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=5241384 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_8004_13
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


5544..5738
DNA (195bp) protein (65aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N; K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] id=5241385 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_8004_14
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


5744..6451
DNA (708bp) protein (236aa)
small subunit ribosomal protein S2
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 id=5241386 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_8004_15
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

6488..7279
DNA (792bp) protein (264aa)
MEMO1 family protein Mhar_0982 n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WLX7_METH6
hypothetical protein
Tax=CG_Micra_04
AB_1215_Bin_116.fna_scaffold_8004_16
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

7393..8130
DNA (738bp) protein (246aa)
hypothetical protein
hypothetical protein id=5241387 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_8004_17

Not on your lists

8177..9805
DNA (1629bp) protein (543aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] id=5241388 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00016154}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00088701};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_8004_18

Not on your lists


9998..10363
DNA (366bp) protein (122aa)
add45; ribosomal protein L7Ae/L30e/S12e/Glarge subunit ribosomal protein L7Ae
ribosomal protein L7Ae/L30e/S12e/Gadd45; K02936 large subunit ribosomal protein L7Ae id=5241390 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L7Ae {ECO:0000256|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000256|HAMAP-Rule:MF_00326}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_8004_19

Not on your lists


10378..10584
DNA (207bp) protein (69aa)
30S ribosomal protein S28, small subunit ribosomal protein S28e
rps28e; 30S ribosomal protein S28; K02979 small subunit ribosomal protein S28e id=5241391 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_116.fna_scaffold_8004_20
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists


10643..10933
DNA (291bp) protein (97aa)
50S ribosomal protein L24e n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0N708_9EURY
50S ribosomal protein L24
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
AB_1215_Bin_116.fna_scaffold_8004_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

11071..11553
DNA (483bp) protein (161aa)
nucleoside-diphosphate kinase (EC:2.7.4.6)
nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=5241393 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_116.fna_scaffold_8004_22
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11555..11893
DNA (339bp) protein (113aa)
dUTP diphosphatase (EC:3.6.1.23)
Probable deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00635}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00635};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00635};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00635}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
Probable deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAL6_METMS
Displaying 23 items

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