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AB_1215_Bin_11.fna_scaffold_10923

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_11.fna_scaffold_10923_1
unknown

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1..465
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

AB_1215_Bin_11.fna_scaffold_10923_2
unknown

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510..899
-----------------
DNA (390bp)
protein (130aa)

This feature has no annotations

AB_1215_Bin_11.fna_scaffold_10923_trna_1
unknown

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comp(905..977)
-----------------
DNA (73bp)
transferRNA Thr
AB_1215_Bin_11.fna_scaffold_10923_3
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1039..1539)
-----------------
DNA (501bp)
protein (167aa)
id=5041691 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_02
AB_1215_Bin_11.fna_scaffold_10923_4
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(1545..2084)
-----------------
DNA (540bp)
protein (180aa)
id=5041692 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_03
AB_1215_Bin_11.fna_scaffold_10923_5
AR4, Woesearchaeaota, DPANN, Archaea

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comp(2126..2731)
-----------------
DNA (606bp)
protein (202aa)
seg id=5041693 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
AB_1215_Bin_11.fna_scaffold_10923_6
CG_Woesearch_02, Woesearchaeota, Archaea

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2877..4076
-----------------
DNA (1200bp)
protein (400aa)
GTPase domain-containing protein; K06942 id=5042272 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
AB_1215_Bin_11.fna_scaffold_10923_7
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

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comp(4077..5060)
-----------------
DNA (984bp)
protein (328aa)
Diguanylate cyclase with GAF sensor n=1 Tax=uncultured bacterium RepID=K2DCS2_9BACT
diguanylate cyclase
Tax=RBG_13_OP3X_46_9_curated
AB_1215_Bin_11.fna_scaffold_10923_8
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(5053..6144)
-----------------
DNA (1092bp)
protein (364aa)
hypothetical protein
DHH phosphoesterases id=5240803 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_11.fna_scaffold_10923_9
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6282..7205
-----------------
DNA (924bp)
protein (308aa)
Putative uncharacterized protein n=1 Tax=Yersinia frederiksenii ATCC 33641 RepID=C4SVL5_YERFR
pentapeptide repeat-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AAM05297.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
AB_1215_Bin_11.fna_scaffold_10923_10

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7832..8773
-----------------
DNA (942bp)
protein (314aa)
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL id=5103746 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_L00346 {ECO:0000313|EMBL:GAF82218.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SpoVT/AbrB protein
AB_1215_Bin_11.fna_scaffold_10923_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(8775..9164)
-----------------
DNA (390bp)
protein (130aa)
Zn-ribbon containing protein id=5800623 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Zn-ribbon containing protein
Tax=CG_Woesearch_02
AB_1215_Bin_11.fna_scaffold_10923_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(9180..9584)
-----------------
DNA (405bp)
protein (135aa)
Putative uncharacterized protein id=5044929 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_02
AB_1215_Bin_11.fna_scaffold_10923_13

Not on your lists

comp(9601..10164)
-----------------
DNA (564bp)
protein (188aa)
small GTP-binding protein; K06883 id=5044930 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46026.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
Small GTP-binding protein
Displaying 14 items

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