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AB_1215_Bin_11.fna_scaffold_11946

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_11.fna_scaffold_11946_1
CG_Woesearch_02, Woesearchaeota, Archaea

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3..533
-----------------
DNA (531bp)
protein (177aa)
30S ribosomal protein S13 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VS15_METIM
30S ribosomal protein S13
Tax=CG_Woesearch_02
AB_1215_Bin_11.fna_scaffold_11946_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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545..1267
-----------------
DNA (723bp)
protein (241aa)
30S ribosomal protein S4 n=2 Tax=Methanotorris RepID=F6BD43_METIK id=5103689 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S4
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_1215_Bin_11.fna_scaffold_11946_3
CG_Woesearch_01, Woesearchaeota, Archaea

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1270..1671
-----------------
DNA (402bp)
protein (134aa)
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps11p; 30S ribosomal protein S11P
Tax=CG_Woesearch_01
AB_1215_Bin_11.fna_scaffold_11946_4
CG_Woesearch_02, Woesearchaeota, Archaea

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1625..2485
-----------------
DNA (861bp)
protein (287aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5049647 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit D
Tax=CG_Woesearch_02
AB_1215_Bin_11.fna_scaffold_11946_trna_1
unknown

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2501..2630
-----------------
DNA (130bp)
transferRNA Pseudo
AB_1215_Bin_11.fna_scaffold_11946_5
CG_Woesearch_02, Woesearchaeota, Archaea

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2641..3003
-----------------
DNA (363bp)
protein (121aa)
50S ribosomal protein L18e n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BD46_METIK
50S ribosomal protein L18
Tax=CG_Woesearch_02
AB_1215_Bin_11.fna_scaffold_11946_6

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3005..3427
-----------------
DNA (423bp)
protein (141aa)
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO id=5103680 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_S00916 {ECO:0000313|EMBL:GAF93287.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L13P
AB_1215_Bin_11.fna_scaffold_11946_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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3424..3825
-----------------
DNA (402bp)
protein (134aa)
30S ribosomal protein S9 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF5_METFV id=5103678 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S9
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_1215_Bin_11.fna_scaffold_11946_8
CG_Woesearch_01, Woesearchaeota, Archaea

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3833..4030
-----------------
DNA (198bp)
protein (66aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] id=5045700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
RNA polymerase, N/8 Kd subunits
Tax=CG_Woesearch_01
AB_1215_Bin_11.fna_scaffold_11946_9
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4039..4788)
-----------------
DNA (750bp)
protein (250aa)
Methyltransferase type 12 id=4845858 bin=PER_GWC2_41_7 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
methyltransferase family protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
AB_1215_Bin_11.fna_scaffold_11946_10

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4846..7500
-----------------
DNA (2655bp)
protein (885aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=5049673 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Leucine-tRNA ligase
AB_1215_Bin_11.fna_scaffold_11946_11
RBG_13_OD1_Falkowbacteria_39_14_curated, Falkowbacteria, Parcubacteria, Bacteria

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7502..7735
-----------------
DNA (234bp)
protein (78aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZZ11_9BACT
Tax=RBG_13_OD1_Falkowbacteria_39_14_curated
AB_1215_Bin_11.fna_scaffold_11946_12
CG_Woesearch_02, Woesearchaeota, Archaea

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8092..9063
-----------------
DNA (972bp)
protein (324aa)
Metal-dependent hydrolase, beta-lactamase superfamily III id=5799925 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
AB_1215_Bin_11.fna_scaffold_11946_13
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9032..9721)
-----------------
DNA (690bp)
protein (230aa)
hypothetical protein id=5048515 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
Displaying 14 items

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