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AB_1215_Bin_11.fna_scaffold_15642

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_11.fna_scaffold_15642_1
unknown

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3..299
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

AB_1215_Bin_11.fna_scaffold_15642_2

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comp(301..2319)
-----------------
DNA (2019bp)
protein (673aa)
mcm; DNA replication initiator protein; K10726 replicative DNA helicase Mcm [EC:3.6.4.-] id=5046315 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA replication initiator protein, replicative DNA helicase Mcm {ECO:0000313|EMBL:KHO46116.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO46116.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
DNA replication initiator Cdc21/Cdc54
AB_1215_Bin_11.fna_scaffold_15642_3

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comp(2423..3043)
-----------------
DNA (621bp)
protein (207aa)
tbpE; transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein id=5046314 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {ECO:0000256|HAMAP-Rule:MF_00408}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
TATA-box-binding protein
AB_1215_Bin_11.fna_scaffold_15642_4

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comp(3329..4096)
-----------------
DNA (768bp)
protein (256aa)
Putative uncharacterized protein id=5042325 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46823.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
AB_1215_Bin_11.fna_scaffold_15642_5
unknown

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comp(4144..4491)
-----------------
DNA (348bp)
protein (116aa)

This feature has no annotations

AB_1215_Bin_11.fna_scaffold_15642_6
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4539..5930)
-----------------
DNA (1392bp)
protein (464aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5042324 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Protein translocase subunit SecY
Tax=CG_Woesearch_02
AB_1215_Bin_11.fna_scaffold_15642_7

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comp(5936..6451)
-----------------
DNA (516bp)
protein (172aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl15p; 50S ribosomal protein L15P; K02876 large subunit ribosomal protein L15 id=5042323 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl15p; 50S ribosomal protein L15
AB_1215_Bin_11.fna_scaffold_15642_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(6451..6876)
-----------------
DNA (426bp)
protein (142aa)
50S ribosomal protein L30P n=7 Tax=Pyrococcus RepID=RL30_PYRAB id=5103273 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L30P
Tax=CG_Woesearch_02
AB_1215_Bin_11.fna_scaffold_15642_9
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(6869..7756)
-----------------
DNA (888bp)
protein (296aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=5041779 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S5
Tax=CG_Woesearch_02
AB_1215_Bin_11.fna_scaffold_15642_10
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7749..8330)
-----------------
DNA (582bp)
protein (194aa)
50S ribosomal protein L18P n=1 Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=RL18_META3
rpl18p; 50S ribosomal protein L18
Tax=CG_Woesearch_02
AB_1215_Bin_11.fna_scaffold_15642_11
unknown

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comp(8332..8448)
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

Displaying 11 items

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