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AB_1215_Bin_11.fna_scaffold_16769

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_11.fna_scaffold_16769_1

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3..503
DNA (501bp) protein (167aa)
Ribosomal RNA assembly protein {ECO:0000313|EMBL:KHO50505.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
KH domain protein; K06961 ribosomal RNA assembly protein id=5048469 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative RNA-processing protein
AB_1215_Bin_11.fna_scaffold_16769_2
CG_Woesearch_02, Woesearchaeota, Archaea

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505..2184
DNA (1680bp) protein (560aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] id=5048468 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA topoisomerase VI, subunit B
Tax=CG_Woesearch_02
AB_1215_Bin_11.fna_scaffold_16769_3
AR15, Woesearchaeaota, DPANN, Archaea

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2177..3262
DNA (1086bp) protein (362aa)
DNA topoisomerase VI subunit A (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit A id=5800437 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
AB_1215_Bin_11.fna_scaffold_16769_4

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comp(3302..3964)
DNA (663bp) protein (221aa)
Conserved TM helix repeat-containing protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDU5_9CHLR id=5102941 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Conserved TM helix repeat-containing protein
Conserved TM helix repeat-containing protein {ECO:0000313|EMBL:AJF62222.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
AB_1215_Bin_11.fna_scaffold_16769_5
AR15, Woesearchaeaota, DPANN, Archaea

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comp(4050..4976)
DNA (927bp) protein (309aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase, catabolic id=5799615 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
AB_1215_Bin_11.fna_scaffold_16769_trna_2
unknown

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comp(5004..5078)
DNA (75bp)
transferRNA Arg
AB_1215_Bin_11.fna_scaffold_16769_trna_1
unknown

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5174..5246
DNA (73bp)
transferRNA Cys
AB_1215_Bin_11.fna_scaffold_16769_6
CG_Woesearch_02, Woesearchaeota, Archaea

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5258..6040
DNA (783bp) protein (261aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] id=5046750 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA (adenine57/58-N1)-methyltransferase
Tax=CG_Woesearch_02
AB_1215_Bin_11.fna_scaffold_16769_7

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comp(6037..6507)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=uncultured bacterium 405006-B04 RepID=S4W813_9BACT
Marine sediment metagenome DNA, contig: S01H1_S12361 {ECO:0000313|EMBL:GAG08480.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AB_1215_Bin_11.fna_scaffold_16769_8
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(6520..7707)
DNA (1188bp) protein (396aa)
Glucose-1-phosphate thymidylyltransferase id=4749385 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:KHE93530.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
glucose-1-phosphate thymidylyltransferase
AB_1215_Bin_11.fna_scaffold_16769_9
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(7709..8119)
DNA (411bp) protein (137aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=planctomycete KSU-1 RepID=I3IGU4_9PLAN
AB_1215_Bin_11.fna_scaffold_16769_10
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(8079..8702)
DNA (624bp) protein (208aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=planctomycete KSU-1 RepID=I3IGU4_9PLAN
Displaying 12 items

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