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AB_1215_Bin_11.fna_scaffold_28232

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_11.fna_scaffold_28232_1
unknown

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comp(41..157)
-----------------
DNA (117bp)
protein (39aa)

This feature has no annotations

AB_1215_Bin_11.fna_scaffold_28232_2
CG_Elusi_02, Elusimicrobia, Bacteria

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comp(302..448)
-----------------
DNA (147bp)
protein (49aa)
Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XPD1_9BACT id=73381 bin=ACD51 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
hypothetical protein
Tax=CG_Elusi_02
AB_1215_Bin_11.fna_scaffold_28232_3

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comp(568..1134)
-----------------
DNA (567bp)
protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51092.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
hypothetical protein; K07572 putative nucleotide binding protein id=5051518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
AB_1215_Bin_11.fna_scaffold_28232_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1201..1554)
-----------------
DNA (354bp)
protein (118aa)
RNA polymerase II, Rpb4 id=5799707 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
AB_1215_Bin_11.fna_scaffold_28232_5
AR15, Woesearchaeaota, DPANN, Archaea

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comp(1557..1847)
-----------------
DNA (291bp)
protein (97aa)
LSU ribosomal protein L21E id=5799708 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L21e
Tax=AR15
AB_1215_Bin_11.fna_scaffold_28232_6

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1983..2390
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein; K09152 hypothetical protein id=5049200 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45191.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
AB_1215_Bin_11.fna_scaffold_28232_7
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(2409..2618)
-----------------
DNA (210bp)
protein (70aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036ECF21
4Fe-4S ferredoxin
Tax=RBG_13_Pacearchaeota_33_26_curated
AB_1215_Bin_11.fna_scaffold_28232_8

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2707..3300
-----------------
DNA (594bp)
protein (198aa)
ZPR1-like zinc finger protein; K06874 zinc finger protein id=5049199 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Zinc finger protein {ECO:0000313|EMBL:KHO45190.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ZPR1-like protein zinc finger protein
AB_1215_Bin_11.fna_scaffold_28232_9

Not on your lists

comp(3290..4543)
-----------------
DNA (1254bp)
protein (418aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.31 {ECO:0000256|HAMAP-Rule:MF_01281};; TaxID=285402 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos9E5.;"
5-methylthioadenosine/S-adenosylhomocysteine deaminase (EC:3.5.4.28)
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=uncultured archaeon GZfos9E5 RepID=Q647P9_9ARCH
AB_1215_Bin_11.fna_scaffold_28232_10

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comp(4540..5238)
-----------------
DNA (699bp)
protein (233aa)
methylthioadenosine phosphorylase (EC:2.4.2.28)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9Q0_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38830.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
AB_1215_Bin_11.fna_scaffold_28232_11
unknown

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5301..5477
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

AB_1215_Bin_11.fna_scaffold_28232_12
AR4, Woesearchaeaota, DPANN, Archaea

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5517..6149
-----------------
DNA (633bp)
protein (211aa)
transmembrane_regions id=5043982 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
Displaying 12 items

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