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AB_1215_Bin_123.fna_scaffold_21705_3

Organism: AB_1215_Bin_123

near complete RP 29 / 55 MC: 8 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 2
Location: comp(780..1832)

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.0
  • Coverage: 228.0
  • Bit_score: 136
  • Evalue 7.30e-29
Probable tRNA pseudouridine synthase D n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YXS1_METPS similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 228.0
  • Bit_score: 136
  • Evalue 5.20e-29
truD; tRNA pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 228.0
  • Bit_score: 136
  • Evalue 1.50e-29

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Taxonomy

Methanocella paludicola → Methanocella → Methanocellales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1053
ATGGGTACTGTGCAGTCTGGTGGAAAGGTTTGTGGGGTGCTTAAATATGCCCCTTCTGATTTTGTTGTCGAGGAGGTTGATGGTTCGGGGAAGGTTTTGAGTGTTGACGGCAAGTATTCTTATGTCGAGGGGTGCGGGGATTTTTTGCATGTTGTTATGAAGAAGAAAAATGTTGATACTATTTCTGCTGTCTTTTCTATATGTTCTAAGCTTGGTGTTCGTGATGCCCGTGTGAATTATGCAGGTGTCAAGGATAGGGTTGCTGTTACTGTGCAGAGAATTTCTTTCTATAAGATGCCTGCCCAGAGGATTTCCGGGCTTCGGATTAAGGATGTCCAGTTGTATCCTGTAGGGCGGGGGGGTAAGGTGTATCTAGGTGATTTGTGGGGCAACAGGTTTACTGTGTGCGTGCGTAATGTTGGTCTTTCGTGTGATGAGTTAAGGGGTTATGTTCGGGGGGTTGTTGGGAGGATGAGGGGGTTTTTTCCTAATTTTTTCGGTGAGCAGAGGTTTGGTGGTGTGCGGCCTGTCACGTGTCCTGTCGGGCGTGCAATACTCGGGGGTGATGTTTCGTGTGCGGTTCGCGAGTATGTTTGCAGGGTGTTTGAGGGTGAGGATGAGGGTATTTCTGATGTGCGCAGGATTGCTGTGATGGGTTTGCGGAGGATGTTTGTGAATGCGGTCCAGTCTTATGTTTTTAATGAGGTTTTGAGGTTGATGGTCAAGGATGGTGTTTGCGCTGAGGGCTTGAGGATTCCGATTGTCGGTTACCTGTACGGGAAGCGCATAATTGAGGGGGTAGCTGATAAGTATGTGGATCGCGTTTTGAGGAAGGAGAAGATTAAGCCGGAGATGTTTAGGTTGCGGGATTTTCCTGAACTGTCGTCTGAGGGCGGTCACAGGATTGCGTTTGAGAAGTTCTATGATTTTGAGGTTGTTTCTGTAGAGAAGGATGAGATGTTTTTGGGTAAGAGTAAGGTTGTTTTGAGGTTTTCGCTTCCTAAGGGGTGTTATGCTACTGTGTTTCTTTCTGAGTTTTTTGATTTTGTGTAG
PROTEIN sequence
Length: 351
MGTVQSGGKVCGVLKYAPSDFVVEEVDGSGKVLSVDGKYSYVEGCGDFLHVVMKKKNVDTISAVFSICSKLGVRDARVNYAGVKDRVAVTVQRISFYKMPAQRISGLRIKDVQLYPVGRGGKVYLGDLWGNRFTVCVRNVGLSCDELRGYVRGVVGRMRGFFPNFFGEQRFGGVRPVTCPVGRAILGGDVSCAVREYVCRVFEGEDEGISDVRRIAVMGLRRMFVNAVQSYVFNEVLRLMVKDGVCAEGLRIPIVGYLYGKRIIEGVADKYVDRVLRKEKIKPEMFRLRDFPELSSEGGHRIAFEKFYDFEVVSVEKDEMFLGKSKVVLRFSLPKGCYATVFLSEFFDFV*