ggKbase home page
Advanced Search
Search Help

AB_1215_Bin_123

DPANN_genomes_binning_unknown_42_0
In projects: DPANN_genomes_binning  |  DPANN

Consensus taxonomy:

Metagenomic Context

Parent: DPANN_genomes_binning_UNK

Properties

Avg. coverage: 0.02 Longest contig: 64.31 Kbp Bin length: 1.75 Mbp GC content: 41.61 %
Contigs count: 225 Features count: 2056 rRNAs count: 0 tRNAs count: 27

Genome completeness

near complete RP 29 / 55 MC: 8 BSCG 20 / 51 MC: 2 ASCG 31 / 38 MC: 2
Displaying items 101-150 of 225 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
AB_1215_Bin_123.fna_scaffold_11996 12 12198 bp 42.05 0.01 87.06
AB_1215_Bin_123.fna_scaffold_20866
Domain: Archaea (50%)
14 10869 bp 43.16 0.01 87.09
AB_1215_Bin_123.fna_scaffold_98160 5 3563 bp 41.93 0.04 87.15
AB_1215_Bin_123.fna_scaffold_341407 5 2481 bp 41.92 0.06 87.18
AB_1215_Bin_123.fna_scaffold_11731 17 9807 bp 40.17 0.02 87.18
AB_1215_Bin_123.fna_scaffold_69214
Domain: Archaea (50%)
8 5773 bp 39.55 0.03 87.25
AB_1215_Bin_123.fna_scaffold_17992 11 7842 bp 42.29 0.02 87.26
AB_1215_Bin_123.fna_scaffold_45554 7 7192 bp 42.20 0.02 87.31
AB_1215_Bin_123.fna_scaffold_11331 8 9981 bp 41.17 0.02 87.80
AB_1215_Bin_123.fna_scaffold_44948 6 4785 bp 43.47 0.03 87.84
AB_1215_Bin_123.fna_scaffold_36147 8 5388 bp 42.98 0.03 87.86
AB_1215_Bin_123.fna_scaffold_150088
Domain: Bacteria (66.67%)
3 2447 bp 43.60 0.06 87.90
AB_1215_Bin_123.fna_scaffold_30530 6 5895 bp 36.23 0.03 87.94
AB_1215_Bin_123.fna_scaffold_76313 5 3584 bp 44.75 0.04 87.97
AB_1215_Bin_123.fna_scaffold_131461 4 2639 bp 42.67 0.06 87.99
AB_1215_Bin_123.fna_scaffold_147926 6 4076 bp 45.04 0.04 88.03
AB_1215_Bin_123.fna_scaffold_72492 6 4458 bp 42.06 0.03 88.29
AB_1215_Bin_123.fna_scaffold_42642 11 9480 bp 42.04 0.02 88.32
AB_1215_Bin_123.fna_scaffold_1212 68 64308 bp 42.57 0.00 88.53
AB_1215_Bin_123.fna_scaffold_10980
Domain: Bacteria (50%)
18 16645 bp 41.57 0.01 88.53
AB_1215_Bin_123.fna_scaffold_16767 15 8153 bp 41.15 0.02 88.53
AB_1215_Bin_123.fna_scaffold_70979 5 6047 bp 40.50 0.02 88.56
AB_1215_Bin_123.fna_scaffold_11821
Domain: Archaea (72.73%)
11 11215 bp 42.69 0.01 88.65
AB_1215_Bin_123.fna_scaffold_3555 18 17897 bp 39.56 0.01 88.66
AB_1215_Bin_123.fna_scaffold_377566
Phylum: Euryarchaeota (60%)
5 3181 bp 37.88 0.05 88.75
AB_1215_Bin_123.fna_scaffold_14652
Domain: Archaea (55.56%)
18 17398 bp 43.83 0.01 88.79
AB_1215_Bin_123.fna_scaffold_71858
Phylum: Euryarchaeota (54.55%)
11 10351 bp 43.03 0.01 88.98
AB_1215_Bin_123.fna_scaffold_28187
Domain: Archaea (50%)
12 9746 bp 42.44 0.02 88.99
AB_1215_Bin_123.fna_scaffold_11088
Domain: Archaea (62.5%)
16 15814 bp 42.77 0.01 89.01
AB_1215_Bin_123.fna_scaffold_151214 4 2435 bp 45.54 0.06 89.08
AB_1215_Bin_123.fna_scaffold_36509 18 14021 bp 42.73 0.01 89.09
AB_1215_Bin_123.fna_scaffold_27764
Domain: Archaea (77.27%)
22 15601 bp 44.20 0.01 89.17
AB_1215_Bin_123.fna_scaffold_38426
Phylum: Euryarchaeota (55.56%)
9 9563 bp 41.79 0.02 89.22
AB_1215_Bin_123.fna_scaffold_54757
Species: BJP_08E140C01_10KDA_Methanosarcinales_43_67 (75%)
4 4297 bp 41.47 0.03 89.23
AB_1215_Bin_123.fna_scaffold_5296 21 21206 bp 37.89 0.01 89.39
AB_1215_Bin_123.fna_scaffold_12739
Domain: Archaea (61.54%)
13 9397 bp 40.72 0.02 89.45
AB_1215_Bin_123.fna_scaffold_38733
Domain: Archaea (87.5%)
8 6211 bp 43.23 0.02 89.45
AB_1215_Bin_123.fna_scaffold_114539
Phylum: Euryarchaeota (66.67%)
3 2854 bp 44.57 0.05 89.56
AB_1215_Bin_123.fna_scaffold_2641
Domain: Archaea (52.63%)
38 45826 bp 42.57 0.00 89.58
AB_1215_Bin_123.fna_scaffold_11224 26 21312 bp 42.11 0.01 89.63
AB_1215_Bin_123.fna_scaffold_184936 4 2173 bp 40.64 0.07 89.74
AB_1215_Bin_123.fna_scaffold_22961 23 12931 bp 44.01 0.01 89.76
AB_1215_Bin_123.fna_scaffold_52191
Domain: Archaea (50%)
4 4415 bp 39.68 0.03 89.76
AB_1215_Bin_123.fna_scaffold_6176 19 17153 bp 45.24 0.01 89.79
AB_1215_Bin_123.fna_scaffold_108943
Species: CG_Woesearch_01 (50%)
4 4423 bp 41.67 0.03 89.80
AB_1215_Bin_123.fna_scaffold_80741
Domain: Archaea (66.67%)
3 3707 bp 43.57 0.04 89.91
AB_1215_Bin_123.fna_scaffold_24572 8 8967 bp 39.72 0.02 90.00
AB_1215_Bin_123.fna_scaffold_62279 6 4009 bp 44.18 0.04 90.17
AB_1215_Bin_123.fna_scaffold_76355 3 3583 bp 41.64 0.04 90.26
AB_1215_Bin_123.fna_scaffold_1235
Domain: Archaea (56.76%)
37 32963 bp 42.47 0.00 90.47
Displaying items 101-150 of 225 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.