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AB_1215_Bin_137.fna_scaffold_889

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_137.fna_scaffold_889_1
unknown

Not on your lists

comp(71..568)
DNA (498bp) protein (166aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_889_2
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(807..1637)
DNA (831bp) protein (277aa)
Beta-lactamase domain-containing protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQC8_METIM
metal dependent hydrolase
Metal dependent hydrolase {ECO:0000313|EMBL:AIF69418.1}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
AB_1215_Bin_137.fna_scaffold_889_3
Hyperthermus butylicus, Hyperthermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists


1723..3402
DNA (1680bp) protein (560aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000255|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00098}; Short=MetRS {ECO:0000255|HAMAP-Rule:MF_00098};; TaxID=415426 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Hyperthermus.;" source="Hyperthermus butylicus (strain DSM 5456 / JCM 9403).;"
Methionine--tRNA ligase n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=SYM_HYPBU
AB_1215_Bin_137.fna_scaffold_889_4
unknown

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3483..4121
DNA (639bp) protein (213aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_889_5
Thermococcus cleftensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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4171..4497
DNA (327bp) protein (109aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=163003 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus cleftensis.;"
Methionine--tRNA ligase n=1 Tax=Thermococcus sp. CL1 RepID=I3ZRJ1_9EURY
methionyl-tRNA synthetase
AB_1215_Bin_137.fna_scaffold_889_6
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(4531..5319)
DNA (789bp) protein (263aa)
haloacid dehalogenase-like hydrolase family protein; K01101 4-nitrophenyl phosphatase [EC:3.1.3.41] id=18313829 bin=Nanosalina tax=Nanosalina
HAD-superfamily hydrolase (EC:3.1.3.18)
Putative HAD superfamily sugar phosphatase {ECO:0000313|EMBL:EGQ43636.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
AB_1215_Bin_137.fna_scaffold_889_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

5462..6526
DNA (1065bp) protein (355aa)
hypothetical protein
NurA domain id=5241666 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Aenigma_01
AB_1215_Bin_137.fna_scaffold_889_8
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

6564..6992
DNA (429bp) protein (143aa)
Putative signal transduction protein n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VRB9_9EURY
signal transduction protein with CBS domains
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_1215_Bin_137.fna_scaffold_889_9

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comp(7118..7465)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U0W0_9EURY
Marine sediment metagenome DNA, contig: S12H4_S16400 {ECO:0000313|EMBL:GAJ09729.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
AB_1215_Bin_137.fna_scaffold_889_10
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(7632..7976)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTE4_METCG id=5103719 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Aenigma_01
AB_1215_Bin_137.fna_scaffold_889_11
unknown

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8097..8333
DNA (237bp) protein (79aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_889_12
CG_Pacearch_06, Pacearchaeota, Archaea

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8456..9307
DNA (852bp) protein (284aa)
membrane protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B71F82
hypothetical protein
Tax=CG_Pacearch_06
AB_1215_Bin_137.fna_scaffold_889_13

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comp(9329..10066)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8U5_METMS id=5103711 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO55655.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
AB_1215_Bin_137.fna_scaffold_889_14
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(10079..10618)
DNA (540bp) protein (180aa)
Transcriptional regulator, ArsR family n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DU40_METV3
ArsR family transcriptional regulator
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_1215_Bin_137.fna_scaffold_889_15
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(10763..11260)
DNA (498bp) protein (166aa)
hypothetical protein id=18311828 bin=Haloredivivus tax=Haloredivivus
Uncharacterized protein {ECO:0000313|EMBL:EHK01953.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
hypothetical protein
AB_1215_Bin_137.fna_scaffold_889_16
unknown

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11362..11727
DNA (366bp) protein (122aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_889_17
unknown

Not on your lists

comp(11781..11942)
DNA (162bp) protein (54aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_889_18
unknown

Not on your lists

comp(11951..12337)
DNA (387bp) protein (129aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_889_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12417..13433
DNA (1017bp) protein (339aa)
Orc1/cdc6 family replication initiation protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI41_9EURY
Orc1/cdc6 family replication initiation protein {ECO:0000313|EMBL:EMA44090.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
AAA ATPase
AB_1215_Bin_137.fna_scaffold_889_20
unknown

Not on your lists

13515..13778
DNA (264bp) protein (88aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_889_21
unknown

Not on your lists

13947..14609
DNA (663bp) protein (221aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_889_22
unknown

Not on your lists

14619..15272
DNA (654bp) protein (218aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_889_23

Not on your lists

15304..16506
DNA (1203bp) protein (401aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=5045811 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Putative queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
tRNA-guanine transglycosylase
AB_1215_Bin_137.fna_scaffold_889_24
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

16537..17523
DNA (987bp) protein (329aa)
Putative 3'-5' exoribonuclease yhaM n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AQD1_9ARCH
metal dependent phosphohydrolase
Tax=BJP_IG2158_Thermoplasmatales_53_16
AB_1215_Bin_137.fna_scaffold_889_25
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17512..19419)
DNA (1908bp) protein (636aa)
epr; minor extracellular protease Epr (EC:3.4.21.-)
Minor extracellular protease Epr {ECO:0000313|EMBL:AHM57842.1}; EC=3.4.21.- {ECO:0000313|EMBL:AHM57842.1};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
Subtilisin n=1 Tax=Methanolobus psychrophilus R15 RepID=K4M7H8_9EURY
AB_1215_Bin_137.fna_scaffold_889_26
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

19599..21029
DNA (1431bp) protein (477aa)
CRISPR-associated protein, TIGR02710 family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IG82_THETR
CRISPR-associated protein, TIGR02710 family
Tax=RBG_13_Pacearchaeota_36_9_curated
AB_1215_Bin_137.fna_scaffold_889_27
unknown

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21096..23192
DNA (2097bp) protein (699aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_889_28
unknown

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23263..23484
DNA (222bp) protein (74aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_889_trna_1
unknown

Not on your lists

23520..23757
DNA (238bp)
transferRNA Trp
AB_1215_Bin_137.fna_scaffold_889_29
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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23797..24534
DNA (738bp) protein (246aa)
# 345625 # 346365 # -1 # ;gc_cont=0.447 id=18313347 bin=Nanosalina tax=Nanosalina
Uncharacterized protein {ECO:0000313|EMBL:EGQ43119.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
Displaying items 1-30 of 52 in total

View Taxonomy