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AB_1215_Bin_137.fna_scaffold_2602

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_137.fna_scaffold_2602_trna_7
unknown

Not on your lists

comp(100..173)
DNA (74bp)
transferRNA Ala
AB_1215_Bin_137.fna_scaffold_2602_1
R_RIF_OP11_03_50_28, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

comp(328..666)
DNA (339bp) protein (113aa)
Ycf68 id=18313551 bin=Nanosalina tax=Nanosalina
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_50_28_curated
AB_1215_Bin_137.fna_scaffold_2602_2
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

Not on your lists

2072..3199
DNA (1128bp) protein (376aa)
hypothetical protein id=8366 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Tax=RBG_13_OP11_40_15_curated
AB_1215_Bin_137.fna_scaffold_2602_trna_6
unknown

Not on your lists

comp(3285..3416)
DNA (132bp)
transferRNA Ala
AB_1215_Bin_137.fna_scaffold_2602_3
Candidatus Parvarchaeum acidiphilum, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

3518..4225
DNA (708bp) protein (236aa)
Putative circadian clock protein, KaiC n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGM1_9EURY
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:EEZ92496.1}; TaxID=662760 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidiphilum ARMAN-4.;"
hypothetical protein
AB_1215_Bin_137.fna_scaffold_2602_trna_5
unknown

Not on your lists

comp(4264..4336)
DNA (73bp)
transferRNA His
AB_1215_Bin_137.fna_scaffold_2602_trna_4
unknown

Not on your lists

comp(4671..4753)
DNA (83bp)
transferRNA Leu
AB_1215_Bin_137.fna_scaffold_2602_4
Thermoanaerobacter mathranii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4875..6290)
DNA (1416bp) protein (472aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=583358 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3).;"
M18 family aminopeptidase n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7APV8_THEM3
peptidase M18 aminopeptidase I
AB_1215_Bin_137.fna_scaffold_2602_5
unknown

Not on your lists

comp(6646..6954)
DNA (309bp) protein (103aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_2602_6
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

7463..7735
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ17615.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
AB_1215_Bin_137.fna_scaffold_2602_7
Cyanidioschyzon merolae, Cyanidioschyzon, Cyanidiales, Bangiophyceae, Eukaryota

Not on your lists


comp(7799..7996)
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] id=18314567 bin=Nanosalina species=unknown genus=unknown taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=Nanosalina
RNA polymerase I, II, III common subunit {ECO:0000313|EMBL:BAM81981.1}; TaxID=280699 species="Eukaryota; Rhodophyta; Bangiophyceae; Cyanidiales; Cyanidiaceae; Cyanidioschyzon.;" source="Cyanidioschyzon merolae strain 10D.;"
RNA polymerase, N/8 Kd subunits
AB_1215_Bin_137.fna_scaffold_2602_8
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(8181..8573)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AAC3_9EURY
30S ribosomal protein S9 {ECO:0000256|RuleBase:RU003817}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
30S ribosomal protein S9
AB_1215_Bin_137.fna_scaffold_2602_9
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(8573..8986)
DNA (414bp) protein (138aa)
50S ribosomal protein L13 n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KPR3_ARCVS
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
AB_1215_Bin_137.fna_scaffold_2602_10
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


comp(8983..9342)
DNA (360bp) protein (120aa)
50S ribosomal protein L18e n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BD46_METIK
50S ribosomal protein L18
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5).;"
AB_1215_Bin_137.fna_scaffold_2602_trna_3
unknown

Not on your lists

comp(9377..9498)
DNA (122bp)
transferRNA Leu
AB_1215_Bin_137.fna_scaffold_2602_11

Not on your lists

comp(9570..10319)
DNA (750bp) protein (250aa)
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5042091 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
AB_1215_Bin_137.fna_scaffold_2602_12
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


comp(10322..10711)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Thermococcus zilligii RepID=UPI000299D2B8
rps11p; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. (strain NA2).;"
AB_1215_Bin_137.fna_scaffold_2602_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


comp(10722..11171)
DNA (450bp) protein (150aa)
30S ribosomal protein S4 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=RS4_METTH
rps4p; 30S ribosomal protein S4
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_1215_Bin_137.fna_scaffold_2602_14
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


comp(11178..11672)
DNA (495bp) protein (165aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S13
Tax=CG_Aenigma_01
AB_1215_Bin_137.fna_scaffold_2602_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

12147..12596
DNA (450bp) protein (150aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
AB_1215_Bin_137.fna_scaffold_2602_trna_2
unknown

Not on your lists

comp(12790..12925)
DNA (136bp)
transferRNA Ser
AB_1215_Bin_137.fna_scaffold_2602_16

Not on your lists

comp(12953..14236)
DNA (1284bp) protein (428aa)
PHP domain protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0A1_DICTD id=5103143 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
PHP protein
PHP protein {ECO:0000313|EMBL:AJF62424.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
AB_1215_Bin_137.fna_scaffold_2602_17
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(14241..15224)
DNA (984bp) protein (328aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01081}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
Probable tRNA pseudouridine synthase B n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRY3_METIM
rRNA pseudouridine synthase
AB_1215_Bin_137.fna_scaffold_2602_18
unknown

Not on your lists

15298..15672
DNA (375bp) protein (125aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_2602_19
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(15674..16381)
DNA (708bp) protein (236aa)
# 24294 # 25007 # -1 # ;gc_cont=0.457 id=18314303 bin=Nanosalina tax=Nanosalina
Putative membrane protein {ECO:0000313|EMBL:EGQ43951.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
hypothetical protein
AB_1215_Bin_137.fna_scaffold_2602_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16462..17853)
DNA (1392bp) protein (464aa)
SecY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5041782 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Protein translocase subunit SecY
Tax=CG_Woesearch_02
AB_1215_Bin_137.fna_scaffold_2602_21
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


comp(17855..18274)
DNA (420bp) protein (140aa)
Ribosomal protein L15 n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QF25_9EURY
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
rpl15p; 50S ribosomal protein L15
AB_1215_Bin_137.fna_scaffold_2602_22
Methanobacterium sp. Maddingley MBC34, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


comp(18283..18741)
DNA (459bp) protein (153aa)
50S ribosomal protein L30P n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TYZ0_9EURY
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1220534 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium sp. Maddingley MBC34.;"
rpl30p; 50S ribosomal protein L30
AB_1215_Bin_137.fna_scaffold_2602_23
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists


comp(18741..19487)
DNA (747bp) protein (249aa)
30S ribosomal protein S5 id=4909406 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rps5p; 30S ribosomal protein S5
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_1215_Bin_137.fna_scaffold_2602_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(19480..20034)
DNA (555bp) protein (185aa)
50S ribosomal protein L18 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D4605
50S ribosomal protein L18
Tax=CG_Woesearch_02
Displaying items 1-30 of 64 in total

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