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AB_1215_Bin_137.fna_scaffold_3003

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_137.fna_scaffold_3003_1
unknown

Not on your lists

comp(3..131)
DNA (129bp) protein (43aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_3003_2
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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239..550
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B1020
hypothetical protein
Tax=RBG_13_Pacearchaeota_33_26_curated
AB_1215_Bin_137.fna_scaffold_3003_3
GWE2_OD1_31_40, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(987..1823)
DNA (837bp) protein (279aa)
esterase; K07001 NTE family protein id=15190350 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
Tax=GWE2_OD1_31_40
AB_1215_Bin_137.fna_scaffold_3003_4
unknown

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2090..2326
DNA (237bp) protein (79aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_3003_5
unknown

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2330..2596
DNA (267bp) protein (89aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_3003_6
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

2968..4026
DNA (1059bp) protein (353aa)
gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QU95_PERMH
Tax=RBG_16_Planctomycetes_59_8_curated
AB_1215_Bin_137.fna_scaffold_3003_7
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4075..4686
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EL78_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI51574.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
AB_1215_Bin_137.fna_scaffold_3003_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

4802..5053
DNA (252bp) protein (84aa)
UPI0003D1B0B2 related cluster n=1 Tax=unknown RepID=UPI0003D1B0B2
Tax=CG_Woesearch_02
AB_1215_Bin_137.fna_scaffold_3003_9
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

5267..6340
DNA (1074bp) protein (358aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=333146 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma.;" source="Ferroplasma acidarmanus fer1.;"
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AMQ0_FERAC
hypothetical protein
AB_1215_Bin_137.fna_scaffold_3003_10
unknown

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comp(6586..7119)
DNA (534bp) protein (178aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_3003_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7230..8429)
DNA (1200bp) protein (400aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1 {ECO:0000256|HAMAP-Rule:MF_01921}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Wyosine base formation domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILI4_NITGG
wyosine base formation domain-containing protein
AB_1215_Bin_137.fna_scaffold_3003_12
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8463..9044
DNA (582bp) protein (194aa)
hypothetical protein id=14624238 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=candidate division DUSEL4 tax=bin5_DeltaP organism_group=Deltaproteobacteria
hexapeptide repeat-containing transferase
Tax=CSP1_8_Deltaproteobacteria
AB_1215_Bin_137.fna_scaffold_3003_13
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

9094..9378
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003629F02
replication factor A1
Tax=CG_Pacearch_06
AB_1215_Bin_137.fna_scaffold_3003_14
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(9398..9733)
DNA (336bp) protein (112aa)
Putative uncharacterized protein id=4111976 bin=GWF2_Ignavibacteria_33_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
hypothetical protein
Tax=CG_Pacearch_04
AB_1215_Bin_137.fna_scaffold_3003_15

Not on your lists

comp(9849..10040)
DNA (192bp) protein (64aa)
Marine sediment metagenome DNA, contig: S12H4_L05252 {ECO:0000313|EMBL:GAI85299.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cold shock DNA binding domain-containing protein
Cold shock DNA binding domain protein id=5799625 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
AB_1215_Bin_137.fna_scaffold_3003_trna_2
unknown

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comp(10099..10190)
DNA (92bp)
transferRNA Glu
AB_1215_Bin_137.fna_scaffold_3003_16
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(10419..10748)
DNA (330bp) protein (110aa)
Bacteriophage 92, 0rf53 id=5799549 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_1215_Bin_137.fna_scaffold_3003_17

Not on your lists

10843..11682
DNA (840bp) protein (280aa)
diguanylate cyclase with PAS/PAC sensor id=126141 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:EKD28214.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
AB_1215_Bin_137.fna_scaffold_3003_18
unknown

Not on your lists

11687..12067
DNA (381bp) protein (127aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_3003_19
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

12131..13417
DNA (1287bp) protein (429aa)
Transporter n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQW2_ARCVS
sodium:neurotransmitter symporter
Transporter {ECO:0000256|RuleBase:RU003732}; Flags: Precursor;; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
AB_1215_Bin_137.fna_scaffold_3003_20
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(13576..13839)
DNA (264bp) protein (88aa)
Predicted addcition module toxin, RelE/Stb type n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NNA6_DESTT
addcition module toxin RelE/Stb
Tax=RBG_16_Micrarchaeota_49_10_curated
AB_1215_Bin_137.fna_scaffold_3003_21
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(13840..14076)
DNA (237bp) protein (79aa)
Tax=RBG_16_Micrarchaeota_49_10_curated
AB_1215_Bin_137.fna_scaffold_3003_trna_1
unknown

Not on your lists

comp(14113..14250)
DNA (138bp)
transferRNA Ser
AB_1215_Bin_137.fna_scaffold_3003_22
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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14305..15261
DNA (957bp) protein (319aa)
ATPase, PP-loop superfamily n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JDV8_THEKO
PP family ATPase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
AB_1215_Bin_137.fna_scaffold_3003_23
unknown

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comp(15244..15807)
DNA (564bp) protein (188aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_3003_24

Not on your lists

comp(15951..16550)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036C5C91
Uncharacterized protein {ECO:0000313|EMBL:KHO45857.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
AB_1215_Bin_137.fna_scaffold_3003_25
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(16712..17359)
DNA (648bp) protein (216aa)
peptidase S54, rhomboid family protein; K07059 id=5044480 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
peptidase S54, rhomboid family protein
Tax=RBG_13_Pacearchaeota_36_9_curated
AB_1215_Bin_137.fna_scaffold_3003_26
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

17507..18979
DNA (1473bp) protein (491aa)
Lysine--tRNA ligase n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QCW6_9EURY
lysyl-tRNA synthetase
Tax=AR17
AB_1215_Bin_137.fna_scaffold_3003_27
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19170..19430
DNA (261bp) protein (87aa)
4Fe-4S binding domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C863_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEC91037.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
dihydroorotate dehydrogenase family protein
Displaying 29 items

View Taxonomy