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AB_1215_Bin_137.fna_scaffold_4425

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_137.fna_scaffold_4425_1

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271..558
DNA (288bp) protein (96aa)
50S ribosomal protein L21e n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VU28_9EURY
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
50S ribosomal protein L21e
AB_1215_Bin_137.fna_scaffold_4425_2

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564..905
DNA (342bp) protein (114aa)
RNA polymerase rpb4; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] id=5044293 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
RNA polymerase DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:KHO48225.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO48225.1};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
AB_1215_Bin_137.fna_scaffold_4425_3
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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917..1474
DNA (558bp) protein (186aa)
hypothetical protein; K07572 putative nucleotide binding protein id=5051518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_1215_Bin_137.fna_scaffold_4425_4
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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1476..2279
DNA (804bp) protein (268aa)
dimethyladenosine transferase (EC:2.1.1.-)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW40_METFV
AB_1215_Bin_137.fna_scaffold_4425_5
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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2321..2902
DNA (582bp) protein (194aa)
Methylase n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RHV9_METVM
methylase
Methylase {ECO:0000313|EMBL:ACX73161.1}; TaxID=579137 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7); (Methanococcus vulcanius).;"
AB_1215_Bin_137.fna_scaffold_4425_6
unknown

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2937..5693
DNA (2757bp) protein (919aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_4425_7
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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5728..6141
DNA (414bp) protein (138aa)
# 393673 # 394023 # -1 # ;gc_cont=0.419 id=18313404 bin=Nanosalina tax=Nanosalina
Uncharacterized protein {ECO:0000313|EMBL:EGQ43191.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
AB_1215_Bin_137.fna_scaffold_4425_8
unknown

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6134..6328
DNA (195bp) protein (65aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_4425_9
unknown

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comp(6329..7009)
DNA (681bp) protein (227aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_4425_10
unknown

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comp(7073..7423)
DNA (351bp) protein (117aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_4425_11
unknown

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7504..7671
DNA (168bp) protein (56aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_4425_12
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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7697..8383
DNA (687bp) protein (229aa)
RNA methyltransferase, TrmH family, group 1 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQT3_METIM
RNA methyltransferase, TrmH family, group 1
RNA methyltransferase, TrmH family, group 1 {ECO:0000313|EMBL:ADG12936.1}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
AB_1215_Bin_137.fna_scaffold_4425_13
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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8383..9579
DNA (1197bp) protein (399aa)
Uncharacterized protein conserved in archaea n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QFW6_9EURY
Uncharacterized protein conserved in archaea {ECO:0000313|EMBL:EGQ43187.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
hypothetical protein
AB_1215_Bin_137.fna_scaffold_4425_14
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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9690..10205
DNA (516bp) protein (172aa)
50S ribosomal protein L10e n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0ACI2_9EURY
50S ribosomal protein L10e {ECO:0000313|EMBL:EHK01484.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
ribosomal protein L10.e
AB_1215_Bin_137.fna_scaffold_4425_15
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

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10294..12276
DNA (1983bp) protein (661aa)
PpsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC; 100938).;"
Phosphoenolpyruvate synthase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYP1_METKA
AB_1215_Bin_137.fna_scaffold_4425_16
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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12495..13424
DNA (930bp) protein (310aa)
diphthine synthase, DPH2 subunit; K07561 diphthamide synthase subunit DPH2 id=18312493 bin=Haloredivivus species=unknown genus=unknown taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=Haloredivivus
Uncharacterized protein {ECO:0000313|EMBL:EHK01482.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
diphthamide biosynthesis protein
AB_1215_Bin_137.fna_scaffold_4425_17
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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13470..13727
DNA (258bp) protein (86aa)
# 638997 # 639239 # -1 # ;gc_cont=0.436 id=18313708 bin=Nanosalina tax=Nanosalina
Uncharacterized protein {ECO:0000313|EMBL:EGQ43513.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
AB_1215_Bin_137.fna_scaffold_4425_18
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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13734..14321
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00036B750C
Tax=RBG_16_Micrarchaeota_49_10_curated
AB_1215_Bin_137.fna_scaffold_4425_19
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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14435..14761
DNA (327bp) protein (109aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1069083 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus villosus KIN24-T80.;"
DNA-directed RNA polymerase subunit n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VZ68_9EURY
transcription-associated protein TFIIS
AB_1215_Bin_137.fna_scaffold_4425_20
unknown

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comp(14758..15420)
DNA (663bp) protein (221aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_4425_21
unknown

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comp(15602..15799)
DNA (198bp) protein (66aa)

This feature has no annotations

AB_1215_Bin_137.fna_scaffold_4425_trna_1
unknown

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comp(15893..16114)
DNA (222bp)
transferRNA Pro
Displaying 22 items

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