ggKbase home page

AB_1215_Bin_159.fna_scaffold_14778

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_159.fna_scaffold_14778_1
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1..189
DNA (189bp) protein (63aa)
Putative iron sulfur cluster assembly protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YVK9_METPS
putative iron sulfur cluster assembly protein
Putative iron sulfur cluster assembly protein {ECO:0000313|EMBL:BAI60481.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
AB_1215_Bin_159.fna_scaffold_14778_2

Not on your lists

213..554
DNA (342bp) protein (114aa)
peptidyl-tRNA hydrolase, PTH2 family (EC:3.1.1.29)
aminoacyl-tRNa hydrolase (EC:3.1.1.29); K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] id=5241658 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Peptidyl-tRNA hydrolase, PTH2 family {ECO:0000313|EMBL:AJF60649.1}; EC=3.1.1.29 {ECO:0000313|EMBL:AJF60649.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_159.fna_scaffold_14778_3
unknown

Not on your lists

comp(574..1218)
DNA (645bp) protein (215aa)

This feature has no annotations

AB_1215_Bin_159.fna_scaffold_14778_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

1330..2007
DNA (678bp) protein (226aa)
hypothetical protein
transmembrane_regions id=5241654 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_159.fna_scaffold_14778_5
unknown

Not on your lists

comp(2026..2166)
DNA (141bp) protein (47aa)

This feature has no annotations

AB_1215_Bin_159.fna_scaffold_14778_6

Not on your lists

comp(2191..2586)
DNA (396bp) protein (132aa)
holliday junction resolvase, archaea type
resolvase, holliday junction-type; K03552 holliday junction resolvase, archaea type id=5241651 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Holliday junction resolvase, archaea type {ECO:0000313|EMBL:AJF60642.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_159.fna_scaffold_14778_7
unknown

Not on your lists

2635..2886
DNA (252bp) protein (84aa)

This feature has no annotations

AB_1215_Bin_159.fna_scaffold_14778_8
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

3076..3372
DNA (297bp) protein (99aa)
UPF0235 protein PYRAB05010 n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Y501_PYRAB
hypothetical protein
UPF0235 protein PYRAB05010 {ECO:0000255|HAMAP-Rule:MF_00634}; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus abyssi (strain GE5 / Orsay).;"
AB_1215_Bin_159.fna_scaffold_14778_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

3419..4858
DNA (1440bp) protein (480aa)
dnaG; DNA primase (EC:2.7.7.-)
dnaG; DNA primase (EC:2.7.7.-) id=5241649 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_159.fna_scaffold_14778_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(4864..5301)
DNA (438bp) protein (146aa)
hypothetical protein
transmembrane_regions id=5241648 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_159.fna_scaffold_14778_trna_1
unknown

Not on your lists

5358..5429
DNA (72bp)
transferRNA Val
AB_1215_Bin_159.fna_scaffold_14778_11
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5529..5903)
DNA (375bp) protein (125aa)
hypothetical protein id=13820 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
AB_1215_Bin_159.fna_scaffold_14778_12
unknown

Not on your lists

6024..6206
DNA (183bp) protein (61aa)

This feature has no annotations

AB_1215_Bin_159.fna_scaffold_14778_13

Not on your lists

6209..7906
DNA (1698bp) protein (566aa)
hypothetical protein
Uncharacterized protein id=5241645 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60636.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_159.fna_scaffold_14778_trna_2
unknown

Not on your lists

8017..8088
DNA (72bp)
transferRNA Gly
AB_1215_Bin_159.fna_scaffold_14778_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

8253..8696
DNA (444bp) protein (148aa)
Metal dependent phosphohydrolase id=4845854 bin=PER_GWC2_41_7 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
metal dependent phosphohydrolase
Tax=RBG_13_Pacearchaeota_36_9_curated
Displaying 16 items

View Taxonomy