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AB_1215_Bin_45.fna_scaffold_3483

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_45.fna_scaffold_3483_1
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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1..618
DNA (618bp) protein (206aa)
transketolase subunit A (EC:2.2.1.1)
Transketolase domain-containing protein n=3 Tax=Thermoanaerobacter RepID=F1ZV45_THEET
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
AB_1215_Bin_45.fna_scaffold_3483_2
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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620..1552
DNA (933bp) protein (311aa)
Transketolase central region n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TSZ7_THETC
transketolase
Transketolase central region {ECO:0000313|EMBL:ADL69395.1}; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM; 571 / NCIB 9385 / NCA 3814) (Clostridium thermosaccharolyticum).;"
AB_1215_Bin_45.fna_scaffold_3483_3
R_Planctomycetes_50_16, Planctomycetes, Bacteria

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1617..2630
DNA (1014bp) protein (338aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CWX2_HALOH
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
AB_1215_Bin_45.fna_scaffold_3483_4
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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2643..3728
DNA (1086bp) protein (362aa)
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] id=14425196 bin=bin1_lowGC species=Clostridium sp. CAG:264 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
3-dehydroquinate synthase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
AB_1215_Bin_45.fna_scaffold_3483_5
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

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3725..5197
DNA (1473bp) protein (491aa)
eMB3004; bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase (EC:1.1.1.25 4.2.1.10)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00036F1F97
Tax=GWB2_Planctomycetes_41_19_curated
AB_1215_Bin_45.fna_scaffold_3483_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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5194..6480
DNA (1287bp) protein (429aa)
3-phosphoshikimate 1-carboxyvinyltransferase n=7 Tax=Clostridium thermocellum RepID=AROA_CLOTH
3-phosphoshikimate 1-carboxyvinyltransferase
Tax=RBG_13_Bathyarchaeota_38_9_curated
AB_1215_Bin_45.fna_scaffold_3483_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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6482..7639
DNA (1158bp) protein (386aa)
chorismate synthase (EC:4.2.3.5)
chorismate synthase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B59EB2
Tax=RBG_13_Bathyarchaeota_38_9_curated
AB_1215_Bin_45.fna_scaffold_3483_8
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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7648..8508
DNA (861bp) protein (287aa)
Prephenate dehydrogenase n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I8L6_METB6
prephenate dehydrogenase
Tax=GWF1_Spirochaetes_41_5_curated
AB_1215_Bin_45.fna_scaffold_3483_9
GWC2_CPR2_39_35, CPR2, Bacteria

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8505..9314
DNA (810bp) protein (270aa)
prephenate dehydratase (EC:4.2.1.51)
P-protein id=2366964 bin=GWD1_TM7_39_7 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
Tax=GWC2_CPR2_39_35
AB_1215_Bin_45.fna_scaffold_3483_10

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9314..10843
DNA (1530bp) protein (510aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00282}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00282};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00282}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Phenylalanine--tRNA ligase alpha subunit id=5800822 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Phenylalanine-tRNA ligase alpha subunit
AB_1215_Bin_45.fna_scaffold_3483_11
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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10845..11888
DNA (1044bp) protein (348aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=523791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125).;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7RCK5_KANKD
phospho-2-dehydro-3-deoxyheptonate aldolase
AB_1215_Bin_45.fna_scaffold_3483_12
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11899..12447
DNA (549bp) protein (183aa)
Transcriptional regulators of sugar metabolism n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ATK6_9CLOT
Transcriptional regulators of sugar metabolism {ECO:0000313|EMBL:EOD00448.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypothetical protein
AB_1215_Bin_45.fna_scaffold_3483_13

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12502..14139
DNA (1638bp) protein (546aa)
Phenylalanyl-tRNA synthetase beta chain {ECO:0000313|EMBL:KHO50510.1}; EC=6.1.1.20 {ECO:0000313|EMBL:KHO50510.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374A334
Phenylalanine-tRNA ligase beta subunit
AB_1215_Bin_45.fna_scaffold_3483_14
unknown

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14229..14516
DNA (288bp) protein (96aa)

This feature has no annotations

AB_1215_Bin_45.fna_scaffold_3483_15

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comp(14530..15036)
DNA (507bp) protein (169aa)
Large subunit ribosomal protein L14e {ECO:0000313|EMBL:KHO49049.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
50S ribosomal protein L14e id=5800175 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L14e
AB_1215_Bin_45.fna_scaffold_3483_16
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(15083..15412)
DNA (330bp) protein (110aa)
50S ribosomal protein L34e n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TYY7_9EURY
hypothetical protein
Tax=RBG_16_Micrarchaeota_49_10_curated
AB_1215_Bin_45.fna_scaffold_3483_17

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comp(15394..16149)
DNA (756bp) protein (252aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51237.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Putative uncharacterized protein id=5042325 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
AB_1215_Bin_45.fna_scaffold_3483_18
AR11, Woesearchaeaota, DPANN, Archaea

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comp(16150..17571)
DNA (1422bp) protein (474aa)
SecY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5041782 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Protein translocase subunit SecY
Tax=AR11
AB_1215_Bin_45.fna_scaffold_3483_19

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comp(17573..18025)
DNA (453bp) protein (151aa)
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L27; K02876 large subunit ribosomal protein L15 id=5046862 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L15P
Displaying 19 items

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