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AB_1215_Bin_45.fna_scaffold_5423

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_45.fna_scaffold_5423_1
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..1469
DNA (1467bp) protein (489aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
Phosphoenolpyruvate synthase n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LTQ4_DESBD
phosphoenolpyruvate synthase
AB_1215_Bin_45.fna_scaffold_5423_2
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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1438..1926
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP28279.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
AB_1215_Bin_45.fna_scaffold_5423_3
AR15, Woesearchaeaota, DPANN, Archaea

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comp(1927..2898)
DNA (972bp) protein (324aa)
Putative RNA methylase id=5800383 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methylase
Tax=AR15
AB_1215_Bin_45.fna_scaffold_5423_4
CG_Pacearch_05, Pacearchaeota, Archaea

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comp(2945..3520)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035C0FA7
Tax=CG_Pacearch_05
AB_1215_Bin_45.fna_scaffold_5423_5
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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3751..4074
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VWU3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ENO12384.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
AB_1215_Bin_45.fna_scaffold_5423_6
AR17, Woesearchaeaota, DPANN, Archaea

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comp(4193..4882)
DNA (690bp) protein (230aa)
RNA methyltransferase, TrmH family, group 1 id=5800379 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
TrmH family RNA methyltransferase, group 1
Tax=AR17
AB_1215_Bin_45.fna_scaffold_5423_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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4996..6084
DNA (1089bp) protein (363aa)
Aminomethyltransferase {ECO:0000255|HAMAP-Rule:MF_00259}; EC=2.1.2.10 {ECO:0000255|HAMAP-Rule:MF_00259};; Glycine cleavage system T protein {ECO:0000255|HAMAP-Rule:MF_00259}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
Aminomethyltransferase n=3 Tax=Caldanaerobacter subterraneus RepID=GCST_THETN
gcvT; glycine cleavage system aminomethyltransferase T
AB_1215_Bin_45.fna_scaffold_5423_8
AR10, Diapherotrites, DPANN, Archaea

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6095..6487
DNA (393bp) protein (131aa)
gcvH; glycine cleavage system H protein
gcvH; glycine cleavage system H protein; K02437 glycine cleavage system H protein id=5240853 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_1215_Bin_45.fna_scaffold_5423_9
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6513..7859
DNA (1347bp) protein (449aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EL09_9FIRM
Glycine dehydrogenase (decarboxylating)
AB_1215_Bin_45.fna_scaffold_5423_10

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7870..9297
DNA (1428bp) protein (476aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
glycine dehydrogenase (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] id=5240855 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_1215_Bin_45.fna_scaffold_5423_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9303..10547)
DNA (1245bp) protein (415aa)
Peptidase M50 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFS7_9EURY id=5103023 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Peptidase M50
Tax=CG_Woesearch_02
AB_1215_Bin_45.fna_scaffold_5423_12
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(10852..11013)
DNA (162bp) protein (54aa)
hypothetical protein
id=5103024 bin=GW2011_AR20_complete species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=CG_Woesearch_01
AB_1215_Bin_45.fna_scaffold_5423_13

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comp(11025..11420)
DNA (396bp) protein (132aa)
Marine sediment metagenome DNA, contig: S01H1_S10434 {ECO:0000313|EMBL:GAG01596.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Translation initiation factor 5A id=5800376 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Translation initiation factor 5A
AB_1215_Bin_45.fna_scaffold_5423_14
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(11473..11688)
DNA (216bp) protein (72aa)
Histone, HmtA n=4 Tax=Methanobrevibacter RepID=A5ULH1_METS3 id=5103251 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Histone, HmtA
Tax=CG_Pacearch_04
AB_1215_Bin_45.fna_scaffold_5423_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(11747..12412)
DNA (666bp) protein (222aa)
hypothetical protein id=5045855 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
AB_1215_Bin_45.fna_scaffold_5423_16
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(12469..13563)
DNA (1095bp) protein (365aa)
peptide chain release factor 1; K03265 peptide chain release factor subunit 1 id=5044062 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
peptide chain release factor 1
Tax=CG_Woesearch_02
AB_1215_Bin_45.fna_scaffold_5423_17
CG_Woesearch_02, Woesearchaeota, Archaea

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13863..14135
DNA (273bp) protein (91aa)
50S ribosomal protein L37Ae
50S ribosomal protein L37Ae id=5799816 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_02
AB_1215_Bin_45.fna_scaffold_5423_18
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

14137..14274
DNA (138bp) protein (46aa)
hypothetical protein
id=5103032 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR11
AB_1215_Bin_45.fna_scaffold_5423_19
unknown

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14271..14507
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 19 items

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