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AB_1215_Bin_45.fna_scaffold_10683

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_45.fna_scaffold_10683_1
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(3..1949)
DNA (1947bp) protein (649aa)
leucyl-tRNA synthetase (EC:6.1.1.4)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=5240720 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Pacearch_04
AB_1215_Bin_45.fna_scaffold_10683_2
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1982..3415)
DNA (1434bp) protein (478aa)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T4C7_9EURY
AB_1215_Bin_45.fna_scaffold_10683_3

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comp(3516..3713)
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_S00836 {ECO:0000313|EMBL:GAF92383.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA-directed RNA polymerase subunit N
AB_1215_Bin_45.fna_scaffold_10683_4
AR9, Woesearchaeaota, DPANN, Archaea

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comp(3720..4121)
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF5_METFV id=5103678 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S9
Tax=AR9
AB_1215_Bin_45.fna_scaffold_10683_5
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4114..4536)
DNA (423bp) protein (141aa)
rpl13p; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=5048339 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
50S ribosomal protein L13P
Tax=CG_Woesearch_02
AB_1215_Bin_45.fna_scaffold_10683_6
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4579..4932)
DNA (354bp) protein (118aa)
50S ribosomal protein L18e n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ALH7_METOI
50S ribosomal protein L18
Tax=CG_Woesearch_02
AB_1215_Bin_45.fna_scaffold_10683_trna_1
unknown

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comp(4966..5062)
DNA (97bp)
transferRNA Leu
AB_1215_Bin_45.fna_scaffold_10683_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(5079..5861)
DNA (783bp) protein (261aa)
DNA-directed RNA polymerase subunit D id=5799890 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit D
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_1215_Bin_45.fna_scaffold_10683_8

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comp(5873..6277)
DNA (405bp) protein (135aa)
Marine sediment metagenome DNA, contig: S01H4_S05167 {ECO:0000313|EMBL:GAH02536.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps11p; 30S ribosomal protein S11P
AB_1215_Bin_45.fna_scaffold_10683_9

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comp(6274..6930)
DNA (657bp) protein (219aa)
30S ribosomal protein S4 id=5799892 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
30S ribosomal protein S4P
AB_1215_Bin_45.fna_scaffold_10683_10
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(6941..7396)
DNA (456bp) protein (152aa)
30S ribosomal protein S13P id=5799893 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S13p
Tax=CG_Woesearch_02
AB_1215_Bin_45.fna_scaffold_10683_11
unknown

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comp(7839..8327)
DNA (489bp) protein (163aa)

This feature has no annotations

AB_1215_Bin_45.fna_scaffold_10683_12

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comp(8342..9217)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036EF829
Uncharacterized protein {ECO:0000313|EMBL:KKN76034.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Glycosyltransferases involved in cell wall biogenesis
AB_1215_Bin_45.fna_scaffold_10683_13
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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9278..10285
DNA (1008bp) protein (336aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR78794.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
id=5045888 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Displaying 14 items

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