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AB_1215_Bin_51.fna_scaffold_2328

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_51.fna_scaffold_2328_1
Oikopleura dioica, Oikopleura, Appendicularia, Chordata, Metazoa

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comp(2..2956)
DNA (2955bp) protein (985aa)
Uncharacterized protein n=1 Tax=Saprolegnia diclina VS20 RepID=T0QB41_9STRA
Whole genome shotgun assembly, reference scaffold set, scaffold scaffold_24 {ECO:0000313|EMBL:CBY24092.1}; TaxID=34765 species="Eukaryota; Metazoa; Chordata; Tunicata; Appendicularia; Oikopleuridae; Oikopleura.;" source="Oikopleura dioica (Tunicate).;"
nuclease (SNase domain-containing protein)
AB_1215_Bin_51.fna_scaffold_2328_2
unknown

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comp(3009..3368)
DNA (360bp) protein (120aa)

This feature has no annotations

AB_1215_Bin_51.fna_scaffold_2328_3
GWA2_OD1_47_26, Parcubacteria, Bacteria

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comp(3407..3952)
DNA (546bp) protein (182aa)
putative cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] id=5043653 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Cytidylate kinase {ECO:0000313|EMBL:KKU72814.1}; TaxID=1618844 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_26.;"
cytidylate kinase
AB_1215_Bin_51.fna_scaffold_2328_4
CG_Woesearch_02, Woesearchaeota, Archaea

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4001..4864
DNA (864bp) protein (288aa)
Putative HTH-type transcriptional regulatory protein Metin_1036 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSZ1_METIM
transcriptional regulator, XRE family
Tax=CG_Woesearch_02
AB_1215_Bin_51.fna_scaffold_2328_5
CG_Woesearch_01, Woesearchaeota, Archaea

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4866..5702
DNA (837bp) protein (279aa)
hypothetical protein id=5801272 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
ROK family protein
Tax=CG_Woesearch_01
AB_1215_Bin_51.fna_scaffold_2328_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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6062..7543
DNA (1482bp) protein (494aa)
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8W1_AMMDK
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_1215_Bin_51.fna_scaffold_2328_7
AR11, Woesearchaeaota, DPANN, Archaea

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7540..7890
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003763F0C
metalloprotease
Tax=AR11
AB_1215_Bin_51.fna_scaffold_2328_8
CG_Woesearch_02, Woesearchaeota, Archaea

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7887..8975
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820E23
30S ribosomal protein S6 modification protein RimK
Tax=CG_Woesearch_02
AB_1215_Bin_51.fna_scaffold_2328_9
CG_Omnitr_04, Omnitrophica, Bacteria

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9048..10061
DNA (1014bp) protein (338aa)
Response regulator receiver modulated diguanylate cyclase id=4202903 bin=GWF2_OP3_43_52 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
response regulator receiver modulated diguanylate cyclase
Tax=CG_Omnitr_04
AB_1215_Bin_51.fna_scaffold_2328_10
unknown

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comp(10064..10324)
DNA (261bp) protein (87aa)

This feature has no annotations

AB_1215_Bin_51.fna_scaffold_2328_11
unknown

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10428..10562
DNA (135bp) protein (45aa)

This feature has no annotations

AB_1215_Bin_51.fna_scaffold_2328_12
R_OD1_Magasanikbacteria_33_17, Magasanikbacteria, Parcubacteria, Bacteria

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10572..13064
DNA (2493bp) protein (831aa)
purL; phosphoribosylformylglycinamidine synthase II (FGAM synthase II); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] id=5096326 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
purL; Phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_33_17_curated
AB_1215_Bin_51.fna_scaffold_2328_13
GWA2_PER_47_7, Peregrinibacteria, Bacteria

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13061..14482
DNA (1422bp) protein (474aa)
purQ; phosphoribosylformylglycinamidine synthase I (FGAM synthase I); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] id=5802248 bin=PER_GWA2_38_35 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
Phosphoribosylformylglycinamidine synthase I {ECO:0000313|EMBL:KKU77799.1}; TaxID=1619058 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_47_7.;"
purQ; Phosphoribosylformylglycinamidine synthase I (FGAM synthase I)
AB_1215_Bin_51.fna_scaffold_2328_14
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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14498..16102
DNA (1605bp) protein (535aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WQZ9_KYRT2
AB_1215_Bin_51.fna_scaffold_2328_15
Hippea maritima, Hippea, Desulfurellales, Deltaproteobacteria, Proteobacteria, Bacteria

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16118..17746
DNA (1629bp) protein (543aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=760142 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfurellales; Desulfurellaceae; Hippea.;" source="Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2).;"
Adenylosuccinate synthetase n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LUM5_HIPMA
AB_1215_Bin_51.fna_scaffold_2328_16

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17782..18735
DNA (954bp) protein (318aa)
Putative RNA methylase id=5800383 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61714.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
RNA methylase
AB_1215_Bin_51.fna_scaffold_2328_17
unknown

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comp(18707..18964)
DNA (258bp) protein (86aa)

This feature has no annotations

AB_1215_Bin_51.fna_scaffold_2328_trna_1
unknown

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comp(19304..19375)
DNA (72bp)
transferRNA Ala
AB_1215_Bin_51.fna_scaffold_2328_18
unknown

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19753..20085
DNA (333bp) protein (111aa)

This feature has no annotations

AB_1215_Bin_51.fna_scaffold_2328_19

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20110..20832
DNA (723bp) protein (241aa)
Conserved hypothetical membrane protein, DUF1624 family n=1 Tax=uncultured archaeon RepID=D1JBY7_9ARCH
Conserved hypothetical membrane protein, DUF1624 family {ECO:0000313|EMBL:CBH39617.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
AB_1215_Bin_51.fna_scaffold_2328_20
AR20, Woesearchaeaota, DPANN, Archaea

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comp(20835..21698)
DNA (864bp) protein (288aa)
Transporter, monovalent cation:proton antiporter-2 family protein n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E279_CARML id=5103851 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transporter, monovalent cation:proton antiporter-2 family protein
Tax=AR20
Displaying 21 items

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