ggKbase home page

AB_1215_Bin_51.fna_scaffold_3220

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_1215_Bin_51.fna_scaffold_3220_1
unknown

Not on your lists

comp(3..233)
DNA (231bp) protein (77aa)

This feature has no annotations

AB_1215_Bin_51.fna_scaffold_3220_2
unknown

Not on your lists

comp(252..1502)
DNA (1251bp) protein (417aa)

This feature has no annotations

AB_1215_Bin_51.fna_scaffold_3220_3
unknown

Not on your lists

comp(1576..1887)
DNA (312bp) protein (104aa)

This feature has no annotations

AB_1215_Bin_51.fna_scaffold_3220_trna_4
unknown

Not on your lists

comp(2061..2162)
DNA (102bp)
transferRNA Ile
AB_1215_Bin_51.fna_scaffold_3220_trna_3
unknown

Not on your lists

comp(2214..2284)
DNA (71bp)
transferRNA Gly
AB_1215_Bin_51.fna_scaffold_3220_trna_2
unknown

Not on your lists

comp(2366..2440)
DNA (75bp)
transferRNA Val
AB_1215_Bin_51.fna_scaffold_3220_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2665..3426
DNA (762bp) protein (254aa)
condensin subunit ScpA; K05896 segregation and condensation protein A id=5048743 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Chromosome segregation and condensation protein ScpA
Tax=CG_Woesearch_02
AB_1215_Bin_51.fna_scaffold_3220_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

3470..3880
DNA (411bp) protein (137aa)
prefoldin subunit alpha; K04797 prefoldin alpha subunit id=5044423 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Prefoldin subunit alpha
Tax=CG_Woesearch_02
AB_1215_Bin_51.fna_scaffold_3220_6

Not on your lists

3883..5334
DNA (1452bp) protein (484aa)
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor id=5048740 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Fused signal recognition particle receptor {ECO:0000313|EMBL:KHO45403.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Signal recognition particle GTPase
AB_1215_Bin_51.fna_scaffold_3220_7
unknown

Not on your lists

5380..5730
DNA (351bp) protein (117aa)

This feature has no annotations

AB_1215_Bin_51.fna_scaffold_3220_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(5731..6393)
DNA (663bp) protein (221aa)
superfamily II helicase (EC:3.6.1.-); K03726 helicase [EC:3.6.4.-] id=5047477 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DEAD/DEAH box helicase
Tax=CG_Woesearch_02
AB_1215_Bin_51.fna_scaffold_3220_9
GWB1_OP11_47_15, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(6395..7579)
DNA (1185bp) protein (395aa)
phosphonopyruvate decarboxylase-like protein; K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] id=15191018 bin=GWC1_OP11_49_16_COMPLETE species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
Putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 {ECO:0000313|EMBL:KKU61175.1}; TaxID=1618371 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWB1_47_15.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
AB_1215_Bin_51.fna_scaffold_3220_10
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(7576..8838)
DNA (1263bp) protein (421aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T9L7_9EURY
AB_1215_Bin_51.fna_scaffold_3220_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(8874..9674)
DNA (801bp) protein (267aa)
hypothetical protein; K07159 id=5048712 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
AB_1215_Bin_51.fna_scaffold_3220_12
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9720..9893)
DNA (174bp) protein (58aa)
UPI000021D016 related cluster id=5800825 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
H/ACA RNA-protein complex component Nop10p
Tax=AR15
AB_1215_Bin_51.fna_scaffold_3220_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(9890..10672)
DNA (783bp) protein (261aa)
translation initiation factor 2 subunit alpha; K03237 translation initiation factor 2 subunit 1 id=5048710 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Translation initiation factor 2 subunit alpha
Tax=CG_Woesearch_02
AB_1215_Bin_51.fna_scaffold_3220_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10675..10857)
DNA (183bp) protein (61aa)
30S ribosomal protein S27e n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEZ2_9EURY id=5103147 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S27e
Tax=CG_Woesearch_02
AB_1215_Bin_51.fna_scaffold_3220_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10868..10981)
DNA (114bp) protein (38aa)
50S ribosomal protein L44e id=5800650 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
LSU ribosomal protein L44E
Tax=CG_Woesearch_02
AB_1215_Bin_51.fna_scaffold_3220_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(11219..11854)
DNA (636bp) protein (212aa)
id=5050691 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=CG_Woesearch_02
AB_1215_Bin_51.fna_scaffold_3220_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11929..13146
DNA (1218bp) protein (406aa)
Radical SAM domain protein id=5800567 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
radical SAM protein
Tax=CG_Woesearch_02
AB_1215_Bin_51.fna_scaffold_3220_18
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13190..15814)
DNA (2625bp) protein (875aa)
id=5047464 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR4
AB_1215_Bin_51.fna_scaffold_3220_trna_1
unknown

Not on your lists

comp(16611..16741)
DNA (131bp)
transferRNA Leu
AB_1215_Bin_51.fna_scaffold_3220_19
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(17154..17381)
DNA (228bp) protein (76aa)
Sm ribonucleoprotein-like protein; K04796 small nuclear ribonucleoprotein id=5048697 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Like-Sm ribonucleoprotein core
Tax=RBG_13_Woesearchaeota_36_6_curated
AB_1215_Bin_51.fna_scaffold_3220_20

Not on your lists

17482..17889
DNA (408bp) protein (136aa)
30S ribosomal protein S8e id=5800762 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
30S ribosomal protein S8e
AB_1215_Bin_51.fna_scaffold_3220_21
unknown

Not on your lists

17957..18721
DNA (765bp) protein (255aa)

This feature has no annotations

AB_1215_Bin_51.fna_scaffold_3220_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

18723..19475
DNA (753bp) protein (251aa)
Tax=AR11
AB_1215_Bin_51.fna_scaffold_3220_23
unknown

Not on your lists

19606..20814
DNA (1209bp) protein (403aa)

This feature has no annotations

AB_1215_Bin_51.fna_scaffold_3220_24
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(20815..21495)
DNA (681bp) protein (227aa)
ribosomal large subunit pseudouridine synthase B (EC:6.1.1.1)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037476DD
Tax=CG_Aenigma_01
AB_1215_Bin_51.fna_scaffold_3220_25
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

21536..22189
DNA (654bp) protein (218aa)
HhH-GPD family protein id=2905331 bin=GWC2_OP3_44_8 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
HhH-GPD family protein
Tax=GWF2_WOR_2_43_52_curated
AB_1215_Bin_51.fna_scaffold_3220_26
unknown

Not on your lists

comp(22170..22937)
DNA (768bp) protein (256aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

View Taxonomy