ggKbase home page

AB_3033_bin_152_scaffold_4402

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_152_scaffold_4402_1
RIFOXYA2_FULL_RIF_OD1_01_38_24_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(3..632)
DNA (630bp) protein (210aa)
Transporter, SSS family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P5Z9_9FIRM
sodium/solute symporter
Tax=RIFOXYA2_FULL_RIF_OD1_01_38_24_curated
AB_3033_bin_152_scaffold_4402_2

Not on your lists

686..1456
DNA (771bp) protein (257aa)
Transcriptional regulator, TrmB id=2823093 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
Transcriptional regulator, TrmB {ECO:0000313|EMBL:KKW24894.1}; TaxID=1620413 species="Bacteria.;" source="bacterium GW2011_GWC1_52_13.;"
transcriptional regulator TrmB
AB_3033_bin_152_scaffold_4402_3
GWA2_Berkelbacteria_38_9, Berkelbacteria, Bacteria

Not on your lists

comp(1449..2834)
DNA (1386bp) protein (462aa)
Uncharacterized phosphotransferase yvkC n=1 Tax=Bacillus megaterium WSH-002 RepID=G2RPL8_BACME
Uncharacterized protein {ECO:0000313|EMBL:KKQ89384.1}; TaxID=1618334 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_38_9.;"
yvkC; phosphotransferase yvkC
AB_3033_bin_152_scaffold_4402_4
unknown

Not on your lists

comp(2831..3727)
DNA (897bp) protein (299aa)

This feature has no annotations

AB_3033_bin_152_scaffold_4402_5
unknown

Not on your lists

comp(3724..4521)
DNA (798bp) protein (266aa)

This feature has no annotations

AB_3033_bin_152_scaffold_4402_6
unknown

Not on your lists

4619..4834
DNA (216bp) protein (72aa)

This feature has no annotations

AB_3033_bin_152_scaffold_4402_7
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(4854..5186)
DNA (333bp) protein (111aa)
hypothetical protein
id=5241305 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_152_scaffold_4402_8
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5320..6195
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W779_UNCMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ35764.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
AB_3033_bin_152_scaffold_4402_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(6217..6471)
DNA (255bp) protein (85aa)
hypothetical protein
hypothetical protein id=5241309 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_152_scaffold_4402_10
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

6550..8637
DNA (2088bp) protein (696aa)
ATP-binding protein (EC:6.3.5.4) id=5049546 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein
Tax=AR18
AB_3033_bin_152_scaffold_4402_11
unknown

Not on your lists

8664..8840
DNA (177bp) protein (59aa)

This feature has no annotations

AB_3033_bin_152_scaffold_4402_12

Not on your lists

comp(8853..9911)
DNA (1059bp) protein (353aa)
teichoic acid biosynthesis-like protein
teichoic acid biosynthesis-like protein id=5240991 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Teichoic acid biosynthesis-like protein {ECO:0000313|EMBL:AJF59982.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_152_scaffold_4402_13
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

comp(9911..10915)
DNA (1005bp) protein (335aa)
Glycosyl transferase group 1 n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E3C5_DICTD
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACK42999.1}; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310 / DSM 6724).;"
AB_3033_bin_152_scaffold_4402_14
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(10987..11391)
DNA (405bp) protein (135aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9 2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] id=5241328 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_152_scaffold_4402_15

Not on your lists

comp(11429..11929)
DNA (501bp) protein (167aa)
ribC; riboflavin synthase (EC:2.5.1.9)
ribC; riboflavin synthase (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] id=5241329 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Riboflavin synthase {ECO:0000313|EMBL:AJF60320.1}; EC=2.5.1.9 {ECO:0000313|EMBL:AJF60320.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_152_scaffold_4402_16
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(11898..12551)
DNA (654bp) protein (218aa)
riboflavin kinase, archaea type (EC:2.7.1.161)
riboflavin/FAD biosynthesis transcriptional regulator (EC:2.7.1.161); K07732 riboflavin kinase, archaea type [EC:2.7.1.161] id=5241330 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_152_scaffold_4402_17

Not on your lists

comp(12618..13694)
DNA (1077bp) protein (359aa)
MscS family membrane protein YnaI
mechanosensitive ion channel protein MscS; K16052 MscS family membrane protein YnaI id=5241331 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
MscS family membrane protein YnaI {ECO:0000313|EMBL:AJF60322.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_152_scaffold_4402_18
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

13924..14202
DNA (279bp) protein (93aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
rpoH; DNA-directed RNA polymerase subunit H; K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] id=5241332 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_152_scaffold_4402_19

Not on your lists

14265..15671
DNA (1407bp) protein (469aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5241333 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:AJF60324.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AJF60324.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_152_scaffold_4402_20
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

15680..17494
DNA (1815bp) protein (605aa)
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5241335 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_152_scaffold_4402_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

17503..18852
DNA (1350bp) protein (450aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'; K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5241336 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Displaying 21 items

View Taxonomy