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AB_3033_bin_152_scaffold_7815

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_152_scaffold_7815_1
unknown

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comp(12..482)
DNA (471bp) protein (157aa)

This feature has no annotations

AB_3033_bin_152_scaffold_7815_2

Not on your lists

543..1838
DNA (1296bp) protein (432aa)
hypothetical protein
hypothetical protein; K06915 id=5240661 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59654.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_152_scaffold_7815_3
unknown

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1940..2035
DNA (96bp) protein (32aa)

This feature has no annotations

AB_3033_bin_152_scaffold_7815_trna_2
unknown

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comp(2095..2168)
DNA (74bp)
transferRNA Val
AB_3033_bin_152_scaffold_7815_4
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2238..3362
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L2Q8_METHD
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:AKB15195.1}; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila CHTI-55.;"
hypothetical protein
AB_3033_bin_152_scaffold_7815_5
unknown

Not on your lists

3628..4110
DNA (483bp) protein (161aa)

This feature has no annotations

AB_3033_bin_152_scaffold_7815_trna_1
unknown

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comp(4128..4246)
DNA (119bp)
transferRNA Pseudo
AB_3033_bin_152_scaffold_7815_6
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4232..5170)
DNA (939bp) protein (313aa)
Tax=RBG_16_Pacearchaeota_35_8_curated
AB_3033_bin_152_scaffold_7815_7

Not on your lists

5277..5894
DNA (618bp) protein (206aa)
cbiM; cobalt/nickel transport system permease protein
cbiM; protein CbiM; K02007 cobalt/nickel transport system permease protein id=5240664 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Cobalt/nickel transport system permease protein {ECO:0000313|EMBL:AJF59657.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_152_scaffold_7815_8
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


comp(5898..6458)
DNA (561bp) protein (187aa)
putative deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] id=5240636 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
Tax=AR10
AB_3033_bin_152_scaffold_7815_9
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

6512..7018
DNA (507bp) protein (169aa)
Tax=CG_Micra_06
AB_3033_bin_152_scaffold_7815_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(7006..7758)
DNA (753bp) protein (251aa)
hypothetical protein
hypothetical protein; K06869 uncharacterized protein id=5241216 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_152_scaffold_7815_11
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7810..8997)
DNA (1188bp) protein (396aa)
Aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LYZ8_GEODF
Nitrate transport ATP-binding protein NrtC {ECO:0000313|EMBL:GAM10240.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
twin-arginine translocation pathway signal protein
AB_3033_bin_152_scaffold_7815_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(8967..9698)
DNA (732bp) protein (244aa)
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5241813 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_13_Pacearchaeota_36_9_curated
AB_3033_bin_152_scaffold_7815_13
unknown

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9794..10141
DNA (348bp) protein (116aa)

This feature has no annotations

AB_3033_bin_152_scaffold_7815_14
unknown

Not on your lists

10410..10607
DNA (198bp) protein (66aa)

This feature has no annotations

AB_3033_bin_152_scaffold_7815_15
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


10650..11360
DNA (711bp) protein (237aa)
Putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain {ECO:0000313|EMBL:ETA68913.1}; EC=3.1.1.- {ECO:0000313|EMBL:ETA68913.1};; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
Ala-tRNA(Pro) hydrolase (EC:3.1.1.-)
UPI0003D1B02C related cluster n=1 Tax=unknown RepID=UPI0003D1B02C
AB_3033_bin_152_scaffold_7815_16
GWC2_SYX_53_9_curated, Bacteria

Not on your lists

11420..11692
DNA (273bp) protein (91aa)
UPF0251 protein Teth514_1147 n=8 Tax=Thermoanaerobacter RepID=Y1147_THEPX
hypothetical protein
Tax=GWC2_SYX_53_9_curated
AB_3033_bin_152_scaffold_7815_17
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

11707..13125
DNA (1419bp) protein (473aa)
amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family id=5044481 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
amino acid permease
Tax=AR5
AB_3033_bin_152_scaffold_7815_18
unknown

Not on your lists

13191..13304
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 20 items

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