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AB_3033_bin_170_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_170_scaffold_55_1

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comp(3..221)
DNA (219bp) protein (73aa)
Marine sediment metagenome DNA, contig: S01H1_S30920 {ECO:0000313|EMBL:GAG35573.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
AB_3033_bin_170_scaffold_55_2

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507..1244
DNA (738bp) protein (246aa)
30S ribosomal protein S15, small subunit ribosomal protein S15
rps15p; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 id=5241415 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S15, small subunit ribosomal protein S15 {ECO:0000313|EMBL:AJF60406.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_55_3
unknown

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1265..1435
DNA (171bp) protein (57aa)

This feature has no annotations

AB_3033_bin_170_scaffold_55_4
AR10, Diapherotrites, DPANN, Archaea

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1442..2056
DNA (615bp) protein (205aa)
small subunit ribosomal protein S3Ae
30S ribosomal protein S3Ae; K02984 small subunit ribosomal protein S3Ae id=5241417 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_55_5

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2059..2748
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO54943.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
hypothetical protein id=5241418 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_3033_bin_170_scaffold_55_6

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2816..3337
DNA (522bp) protein (174aa)
hypothetical protein
hypothetical protein id=5241420 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60411.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_55_7
AR10, Diapherotrites, DPANN, Archaea

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3337..3834
DNA (498bp) protein (166aa)
hypothetical protein
transmembrane_regions id=5241421 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_55_8
R_OP11_Levybacteria_37_10, Levybacteria, Microgenomates, Bacteria

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4116..4295
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Thermus igniterrae RepID=UPI0003708185
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_10_curated
AB_3033_bin_170_scaffold_55_9

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comp(4460..6070)
DNA (1611bp) protein (537aa)
hypothetical protein
putative preprotein translocase subunit SecD id=5241422 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60413.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_55_10
AR10, Diapherotrites, DPANN, Archaea

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comp(6070..7146)
DNA (1077bp) protein (359aa)
preprotein translocase subunit SecF
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5241423 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_55_11

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7261..8244
DNA (984bp) protein (328aa)
Putative gtp1/obg family GTP-binding protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RF26_9EURY
Marine sediment metagenome DNA, contig: S06H3_S19145 {ECO:0000313|EMBL:GAI52657.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
gtp1/obg family GTP-binding protein
AB_3033_bin_170_scaffold_55_12
unknown

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8660..9049
DNA (390bp) protein (130aa)

This feature has no annotations

AB_3033_bin_170_scaffold_55_13
AR10, Diapherotrites, DPANN, Archaea

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9226..9498
DNA (273bp) protein (91aa)
hypothetical protein
hypothetical protein; K09721 hypothetical protein id=5241424 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_55_14

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9504..11027
DNA (1524bp) protein (508aa)
DNA polymerase II small subunit (EC:2.7.7.7)
DNA polymerase II small subunit (EC:2.7.7.7); K02323 DNA polymerase II small subunit [EC:2.7.7.7] id=5241425 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_55_15
AR10, Diapherotrites, DPANN, Archaea

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11079..14537
DNA (3459bp) protein (1153aa)
DNA polymerase II, large subunit DP2 (EC:2.7.7.7); K02322 DNA polymerase II large subunit [EC:2.7.7.7] id=5241426 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA polymerase II large subunit (EC:2.7.7.7)
Tax=AR10
AB_3033_bin_170_scaffold_55_16
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

14642..14935
DNA (294bp) protein (98aa)
hypothetical protein
hypothetical protein id=5241182 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Micra_03
AB_3033_bin_170_scaffold_55_17
unknown

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15177..15362
DNA (186bp) protein (62aa)

This feature has no annotations

AB_3033_bin_170_scaffold_55_18
unknown

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15639..15908
DNA (270bp) protein (90aa)
hypothetical protein
AB_3033_bin_170_scaffold_55_19
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15909..16226)
DNA (318bp) protein (106aa)
id=5048700 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
AB_3033_bin_170_scaffold_55_20
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(16392..17615)
DNA (1224bp) protein (408aa)
cdc6; archaeal cell division control protein 6
cdc6; cell division control protein 6; K10725 archaeal cell division control protein 6 id=5241429 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_55_21

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17851..18204
DNA (354bp) protein (118aa)
hypothetical protein
Cell division protein SepF/SepF-related id=5241428 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60419.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_55_22
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

18332..19123
DNA (792bp) protein (264aa)
Tax=CG_Micra_04
AB_3033_bin_170_scaffold_55_23
RLO_RIF03_38_15, RIF3, Bacteria

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comp(19132..19983)
DNA (852bp) protein (284aa)
hypothetical protein id=127889 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
AB_3033_bin_170_scaffold_55_24
RLO_RIF03_38_15, RIF3, Bacteria

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comp(19985..20962)
DNA (978bp) protein (326aa)
Putative uncharacterized protein id=4907655 bin=GWC2_Pelobacter_58_13 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
AB_3033_bin_170_scaffold_55_25

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21021..22340
DNA (1320bp) protein (440aa)
hypothetical protein; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] id=42436 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Uncharacterized protein {ECO:0000313|EMBL:EKD85676.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
AB_3033_bin_170_scaffold_55_26
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(22332..24323)
DNA (1992bp) protein (664aa)
putative NHL repeat containing protein id=14425775 bin=bin1_lowGC species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
cell surface protein
Tax=CSP1_2_Dadabacteria
AB_3033_bin_170_scaffold_55_27
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(24370..25350)
DNA (981bp) protein (327aa)
Predicted Fe-S oxidoreductases id=3514427 bin=GWF2_OP3_38_59 species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
radical SAM protein
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
AB_3033_bin_170_scaffold_55_28
unknown

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comp(25502..26293)
DNA (792bp) protein (264aa)

This feature has no annotations

AB_3033_bin_170_scaffold_55_29
unknown

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comp(26340..26561)
DNA (222bp) protein (74aa)

This feature has no annotations

AB_3033_bin_170_scaffold_55_30
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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comp(26593..27981)
DNA (1389bp) protein (463aa)
Radical SAM domain protein {ECO:0000313|EMBL:KKP27975.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
radical SAM protein id=5041836 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
His-Xaa-Ser system radical SAM maturase HxsB
Displaying items 1-30 of 113 in total

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