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AB_3033_bin_170_scaffold_363

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_170_scaffold_363_1
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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166..495
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDN2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM76007.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
AB_3033_bin_170_scaffold_363_2
unknown

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comp(492..809)
DNA (318bp) protein (106aa)

This feature has no annotations

AB_3033_bin_170_scaffold_363_3

Not on your lists

comp(809..1492)
DNA (684bp) protein (228aa)
triosephosphate isomerase TIM (EC:5.3.1.1)
triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] id=5241598 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_363_4

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1570..3450
DNA (1881bp) protein (627aa)
GTP pyrophosphokinase (EC:2.7.6.5)
GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((P)ppGpp synthetase) (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] id=5241595 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
GTP pyrophosphokinase {ECO:0000313|EMBL:AJF60586.1}; EC=2.7.6.5 {ECO:0000313|EMBL:AJF60586.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_363_5
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

3554..4294
DNA (741bp) protein (247aa)
hypothetical protein
hypothetical protein id=5241590 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_363_6
RBG_16_OP11_Gottesmanbacteria_37_8_curated, Gottesmanbacteria, Microgenomates, Bacteria

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comp(4291..5889)
DNA (1599bp) protein (533aa)
Lysine--tRNA ligase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXF8_METFV
lysyl-tRNA synthetase
Tax=RBG_16_OP11_Gottesmanbacteria_37_8_curated
AB_3033_bin_170_scaffold_363_7
AR10, Diapherotrites, DPANN, Archaea

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comp(5926..8223)
DNA (2298bp) protein (766aa)
fibronectin type III protein
fibronectin type III domain-containing protein id=5241131 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_363_8
CG_CPR16-01, CG_CPR16, Bacteria

Not on your lists

comp(8314..8754)
DNA (441bp) protein (147aa)
MutT/NUDIX family protein id=2387351 bin=GWD1_TM7_39_7 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
MutT/nudix family protein
Tax=CG_CPR16-01
AB_3033_bin_170_scaffold_363_9
unknown

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comp(8913..9779)
DNA (867bp) protein (289aa)

This feature has no annotations

AB_3033_bin_170_scaffold_363_10
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9874..10335)
DNA (462bp) protein (154aa)
ComE operon protein 2 {ECO:0000313|EMBL:KDR94806.1}; EC=3.5.-.- {ECO:0000313|EMBL:KDR94806.1};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
comEB; ComE operon protein 2 (EC:3.5.-.-)
CMP/dCMP deaminase zinc-binding n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PNM9_9FIRM
AB_3033_bin_170_scaffold_363_trna_3
unknown

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comp(10348..10474)
DNA (127bp)
transferRNA Lys
AB_3033_bin_170_scaffold_363_trna_2
unknown

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comp(10537..10610)
DNA (74bp)
transferRNA Lys
AB_3033_bin_170_scaffold_363_11
unknown

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comp(10704..11030)
DNA (327bp) protein (109aa)

This feature has no annotations

AB_3033_bin_170_scaffold_363_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(11041..12312)
DNA (1272bp) protein (424aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=5241573 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_363_13
AR10, Diapherotrites, DPANN, Archaea

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12370..12906
DNA (537bp) protein (179aa)
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] id=5241572 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
Tax=AR10
AB_3033_bin_170_scaffold_363_14

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12938..13483
DNA (546bp) protein (182aa)
transcription initiation factor TFIIE subunit alpha
transcription factor TFIIE subunit alpha; K03136 transcription initiation factor TFIIE subunit alpha id=5241571 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Transcription initiation factor TFIIE {ECO:0000256|HAMAP-Rule:MF_01909}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_363_trna_1
unknown

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13680..13754
DNA (75bp)
transferRNA Met
AB_3033_bin_170_scaffold_363_15
AR10, Diapherotrites, DPANN, Archaea

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14263..14724
DNA (462bp) protein (154aa)
hypothetical protein
id=5241570 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_363_16

Not on your lists

comp(14766..15356)
DNA (591bp) protein (197aa)
hypothetical protein
seg id=5241568 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60559.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_363_17
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(15531..15830)
DNA (300bp) protein (100aa)
Putative uncharacterized protein id=4933086 bin=GWA2_Ignavibacteria-rel_35_8 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=AR10
AB_3033_bin_170_scaffold_363_18
AR10, Diapherotrites, DPANN, Archaea

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comp(16513..17403)
DNA (891bp) protein (297aa)
integrase/recombinase xerd, integrase/recombinase XerD
xerD-like; integrase/recombinase xerd; K04763 integrase/recombinase XerD id=5241566 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_363_19
unknown

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17494..17709
DNA (216bp) protein (72aa)

This feature has no annotations

AB_3033_bin_170_scaffold_363_20
AR10, Diapherotrites, DPANN, Archaea

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comp(17781..18014)
DNA (234bp) protein (78aa)
hypothetical protein
transmembrane_regions id=5241564 bin=GW2011_AR10_complete species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_363_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

18130..18315
DNA (186bp) protein (62aa)
hypothetical protein
id=5241627 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_363_22

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18529..19017
DNA (489bp) protein (163aa)
deoxyribonuclease/rho motif-related TRAM
deoxyribonuclease/rho motif-related TRAM id=5241628 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Deoxyribonuclease/rho motif-related TRAM {ECO:0000313|EMBL:AJF60619.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_363_23
unknown

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19363..19647
DNA (285bp) protein (95aa)

This feature has no annotations

AB_3033_bin_170_scaffold_363_24

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19698..20078
DNA (381bp) protein (127aa)
metallopeptidase
metallopeptidase id=5241554 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Metallopeptidase {ECO:0000313|EMBL:AJF60545.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_363_25

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comp(20131..20421)
DNA (291bp) protein (97aa)
replication factor A1
single-stranded DNA-binding protein; K07466 replication factor A1 id=5241180 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Replication factor A1 {ECO:0000313|EMBL:AJF60171.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_363_26
unknown

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21269..21445
DNA (177bp) protein (59aa)

This feature has no annotations

AB_3033_bin_170_scaffold_363_27
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21510..22427
DNA (918bp) protein (306aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
tRNA-dihydrouridine synthase n=2 Tax=Clostridiales RepID=D4LM25_9FIRM
tRNA-U20-dihydrouridine synthase
Displaying items 1-30 of 107 in total

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