ggKbase home page

AB_3033_bin_170_scaffold_509

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_170_scaffold_509_1
unknown

Not on your lists

324..533
DNA (210bp) protein (70aa)

This feature has no annotations

AB_3033_bin_170_scaffold_509_2
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(624..1577)
DNA (954bp) protein (318aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1).;"
Orotidine 5'-phosphate decarboxylase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K798_HALHC
orotidine 5''-phosphate decarboxylase, subfamily 2
AB_3033_bin_170_scaffold_509_3
Planomicrobium sp. ES2, Planomicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1574..2218)
DNA (645bp) protein (215aa)
HAD hydrolase, family IA n=1 Tax=Paenisporosarcina sp. HGH0030 RepID=S2XEN0_9BACL
Pyrophosphatase PpaX {ECO:0000313|EMBL:CEG23457.1}; TaxID=1499687 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planomicrobium.;" source="Planomicrobium sp. ES2.;"
HAD-superfamily hydrolase
AB_3033_bin_170_scaffold_509_4
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

comp(2423..3664)
DNA (1242bp) protein (414aa)
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PBK6_DEFDS
Tax=BJP_IG2158_OD1_28_51
AB_3033_bin_170_scaffold_509_5
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

3932..11806
DNA (7875bp) protein (2625aa)
hypothetical protein
Os06g0316300 id=5241248 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_509_6
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

12019..19173
DNA (7155bp) protein (2385aa)
hypothetical protein
transmembrane_regions id=5241250 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_509_7

Not on your lists

19222..26703
DNA (7482bp) protein (2494aa)
hypothetical protein
transmembrane_regions id=5241251 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60242.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_509_8
unknown

Not on your lists

26752..27168
DNA (417bp) protein (139aa)

This feature has no annotations

AB_3033_bin_170_scaffold_509_9

Not on your lists

27205..27558
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55749.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
transmembrane_regions id=5241253 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_3033_bin_170_scaffold_509_10

Not on your lists

27673..27915
DNA (243bp) protein (81aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO55748.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
transmembrane_regions id=5241254 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_3033_bin_170_scaffold_509_11
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

28063..28371
DNA (309bp) protein (103aa)
hypothetical protein
transmembrane_regions id=5241255 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_509_12
unknown

Not on your lists

28374..28736
DNA (363bp) protein (121aa)

This feature has no annotations

AB_3033_bin_170_scaffold_509_13
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(28785..29273)
DNA (489bp) protein (163aa)
hypothetical protein
seg id=5241257 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_509_14
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

29360..30862
DNA (1503bp) protein (501aa)
hypothetical protein
seg id=5241258 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_509_15
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(30898..31374)
DNA (477bp) protein (159aa)
hypothetical protein
seg id=5241259 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_509_16
unknown

Not on your lists

31482..32345
DNA (864bp) protein (288aa)

This feature has no annotations

AB_3033_bin_170_scaffold_509_17

Not on your lists

32401..34803
DNA (2403bp) protein (801aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase Pol2; K02319 DNA polymerase I [EC:2.7.7.7] id=5241260 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_509_18
Pristionchus pacificus, Pristionchus, Diplogasterida, Chromadorea, Nematoda, Metazoa

Not on your lists

34843..37977
DNA (3135bp) protein (1045aa)
Uncharacterized protein n=1 Tax=Pristionchus pacificus RepID=H3FE90_PRIPA
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PPA20571}; TaxID=54126 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Diplogasterida; Neodiplogasteridae; Pristionchus.;" source="Pristionchus pacificus (Parasitic nematode).;"
internalin, putative
AB_3033_bin_170_scaffold_509_19

Not on your lists

38056..38970
DNA (915bp) protein (305aa)
methionyl aminopeptidase (EC:3.4.11.18)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] id=5241261 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01975, ECO:0000256|RuleBase:RU003653}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01975};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01975};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01975, ECO:0000256|RuleBase:RU003653};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01975}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_509_20
unknown

Not on your lists

39032..40120
DNA (1089bp) protein (363aa)

This feature has no annotations

AB_3033_bin_170_scaffold_509_trna_1
unknown

Not on your lists

40154..40225
DNA (72bp)
transferRNA Arg
AB_3033_bin_170_scaffold_509_21
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

40293..41465
DNA (1173bp) protein (391aa)
Integrase family protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2W9_FERPA
integrase
Integrase family protein {ECO:0000313|EMBL:ADC64602.1}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
AB_3033_bin_170_scaffold_509_22
unknown

Not on your lists

41515..42000
DNA (486bp) protein (162aa)

This feature has no annotations

AB_3033_bin_170_scaffold_509_23
unknown

Not on your lists

42040..42543
DNA (504bp) protein (168aa)

This feature has no annotations

AB_3033_bin_170_scaffold_509_24
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(42654..43103)
DNA (450bp) protein (150aa)
Transcriptional regulator, AsnC family n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY20_METFV
ArsR family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADP77202.1}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
AB_3033_bin_170_scaffold_509_25
R_OD1_Uhrbacteria_49_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

43376..43885
DNA (510bp) protein (170aa)
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_49_11_curated
AB_3033_bin_170_scaffold_509_26
GWA2_OP11_35_8_partial, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

43933..44343
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP86738.1}; TaxID=1618479 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_35_8.;"
AB_3033_bin_170_scaffold_509_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

44614..44826
DNA (213bp) protein (71aa)
Uncharacterized protein family UPF0150 n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0V6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KCZ72506.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
AB_3033_bin_170_scaffold_509_28
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

44819..45046
DNA (228bp) protein (76aa)
YcfA family protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0V7_9EURY
YcfA family protein {ECO:0000313|EMBL:EHQ36250.1}; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
YcfA family protein
AB_3033_bin_170_scaffold_509_29
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

45228..45446
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TZ66_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMR75071.1}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
hypothetical protein
Displaying items 1-30 of 60 in total

View Taxonomy