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AB_3033_bin_170_scaffold_1217

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_170_scaffold_1217_1
RIFOXYD1_FULL_OP11_Collierbacteria_40_9_curated, Collierbacteria, Microgenomates, Bacteria

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119..1123
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZRV8_DESOH
hypothetical protein
Tax=RIFOXYD1_FULL_OP11_Collierbacteria_40_9_curated
AB_3033_bin_170_scaffold_1217_2

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comp(1177..2079)
DNA (903bp) protein (301aa)
ribonuclease Z (EC:3.1.26.11)
ribonuclease Z; K00784 ribonuclease Z [EC:3.1.26.11] id=5241752 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_1217_3
CG_Micra_04, Micraarchaeota, Archaea

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2189..3205
DNA (1017bp) protein (339aa)
Lon-like protein ATP-dependent protease (EC:3.4.21.-)
ATP-dependent protease La; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] id=5241757 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Micra_04
AB_3033_bin_170_scaffold_1217_4
unknown

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3500..3730
DNA (231bp) protein (77aa)

This feature has no annotations

AB_3033_bin_170_scaffold_1217_5
unknown

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3887..4195
DNA (309bp) protein (103aa)
Predicted ATP-dependent protease n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A0L2_THESM
ATP-dependent protease
AB_3033_bin_170_scaffold_1217_6
unknown

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comp(4774..5061)
DNA (288bp) protein (96aa)

This feature has no annotations

AB_3033_bin_170_scaffold_1217_7
CG_CPR10_03, CG_CPR10, Bacteria

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comp(5062..5436)
DNA (375bp) protein (125aa)
aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Nostoc sp. ATCC 53789 RepID=A4D939_9NOSO
Tax=CG_CPR10_03
AB_3033_bin_170_scaffold_1217_8
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(5400..6701)
DNA (1302bp) protein (434aa)
Conserved protein n=2 Tax=Methanosarcina mazei RepID=Q8Q0W1_METMA
hypothetical protein
Tax=CG_Woesearch_01
AB_3033_bin_170_scaffold_1217_9
unknown

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6849..7184
DNA (336bp) protein (112aa)

This feature has no annotations

AB_3033_bin_170_scaffold_1217_10
unknown

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7159..7476
DNA (318bp) protein (106aa)

This feature has no annotations

AB_3033_bin_170_scaffold_1217_11

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7537..8967
DNA (1431bp) protein (477aa)
Lon-like protein ATP-dependent protease (EC:3.4.21.-)
ATP-dependent protease La; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] id=5241757 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Lon-like protein ATP-dependent protease {ECO:0000313|EMBL:AJF60748.1}; EC=3.4.21.- {ECO:0000313|EMBL:AJF60748.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_1217_12
AR10, Diapherotrites, DPANN, Archaea

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comp(8968..10185)
DNA (1218bp) protein (406aa)
hypothetical protein
hypothetical protein; K08975 putative membrane protein id=5241758 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_1217_13

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10276..11247
DNA (972bp) protein (324aa)
hypothetical protein
Mechanosensory protein, putative id=5241759 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60750.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_1217_14

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comp(11297..12202)
DNA (906bp) protein (302aa)
hypothetical protein
Uncharacterized membrane protein id=5241760 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60751.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_1217_15
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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12299..12868
DNA (570bp) protein (190aa)
Exosome complex RNA-binding protein Csl4 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW44_METFV
exosome complex RNA-binding protein csl4
Exosome complex component Csl4 {ECO:0000256|HAMAP-Rule:MF_00975}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
AB_3033_bin_170_scaffold_1217_16
AR10, Diapherotrites, DPANN, Archaea

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12920..13192
DNA (273bp) protein (91aa)
DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] id=5241762 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_1217_17
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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13203..13763
DNA (561bp) protein (187aa)
UPF0215 protein Mfer_1016 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW46_METFV
hypothetical protein
UPF0215 protein Mfer_1016 {ECO:0000256|HAMAP-Rule:MF_00582}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
AB_3033_bin_170_scaffold_1217_18
AR10, Diapherotrites, DPANN, Archaea

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13822..14583
DNA (762bp) protein (254aa)
signal peptidase, endoplasmic reticulum-type (EC:3.4.-.-)
signal peptidase subunit; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] id=5241763 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_1217_19
unknown

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14619..15497
DNA (879bp) protein (293aa)

This feature has no annotations

AB_3033_bin_170_scaffold_1217_20
AR10, Diapherotrites, DPANN, Archaea

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15552..16295
DNA (744bp) protein (248aa)
proliferating cell nuclear antigen
proliferating-cell nuclear antigen Pol30; K04802 proliferating cell nuclear antigen id=5241764 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_1217_21
CG_Micra_05, Micraarchaeota, Archaea

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16420..18015
DNA (1596bp) protein (532aa)
Putative membrane protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZA82_9CLOT
hypothetical protein
Tax=CG_Micra_05
AB_3033_bin_170_scaffold_1217_22
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

18136..18498
DNA (363bp) protein (121aa)
potassium channel protein id=5040537 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
potassium channel protein
Tax=CG_Micra_02
AB_3033_bin_170_scaffold_1217_23

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18595..19317
DNA (723bp) protein (241aa)
proliferating cell nuclear antigen
proliferating cell nuclear antigen PcnA; K04802 proliferating cell nuclear antigen id=5241766 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_1217_24
unknown

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comp(19322..19912)
DNA (591bp) protein (197aa)

This feature has no annotations

AB_3033_bin_170_scaffold_1217_25

Not on your lists

20004..21059
DNA (1056bp) protein (352aa)
priL; DNA primase large subunit (EC:2.7.7.-)
priL; DNA primase, large subunit (EC:2.7.7.-); K02685 DNA primase large subunit [EC:2.7.7.-] id=5241767 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA primase large subunit PriL {ECO:0000256|HAMAP-Rule:MF_00701}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_170_scaffold_1217_26
AR10, Diapherotrites, DPANN, Archaea

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21059..22306
DNA (1248bp) protein (416aa)
putative DNA primase, small subunit; K02683 DNA primase [EC:2.7.7.-] id=5241769 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
Tax=AR10
AB_3033_bin_170_scaffold_1217_27
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

22303..22848
DNA (546bp) protein (182aa)
hypothetical protein
hypothetical protein; K09723 hypothetical protein id=5241770 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_1217_28
AR10, Diapherotrites, DPANN, Archaea

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23054..23833
DNA (780bp) protein (260aa)
translation initiation factor 2 subunit 1
translation initiation factor 2 subunit alpha; K03237 translation initiation factor 2 subunit 1 id=5241772 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_1217_29
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

23835..24611
DNA (777bp) protein (259aa)
hypothetical protein
hypothetical protein; K07159 id=5241773 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_170_scaffold_1217_30
AR10, Diapherotrites, DPANN, Archaea

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comp(24612..25874)
DNA (1263bp) protein (421aa)
hypothetical protein
hypothetical protein id=5241776 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Displaying items 1-30 of 38 in total

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