ggKbase home page

AB_3033_bin_53_scaffold_684

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_53_scaffold_684_1
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

1..507
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI000365532B
Nucleotidyl transferase domain
Tax=CG_Pacearch_02
AB_3033_bin_53_scaffold_684_2
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

500..973
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00035C462D
hypothetical protein
Tax=CG_Pacearch_02
AB_3033_bin_53_scaffold_684_3
RIFOXYC2_FULL_RIF_OD1_03_42_11_curated, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(1371..2009)
DNA (639bp) protein (213aa)
Tax=RIFOXYC2_FULL_RIF_OD1_03_42_11_curated
AB_3033_bin_53_scaffold_684_4
unknown

Not on your lists

comp(2023..2247)
DNA (225bp) protein (75aa)

This feature has no annotations

AB_3033_bin_53_scaffold_684_5
GWA1_OP11_41_11_plus, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(2252..2440)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036FCC54
Uncharacterized protein {ECO:0000313|EMBL:KKR86612.1}; TaxID=1618409 species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWA1_41_11.;"
AB_3033_bin_53_scaffold_684_6
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(2726..5203)
DNA (2478bp) protein (826aa)
Cna B domain-containing protein (Fragment) n=1 Tax=Haloplasma contractile SSD-17B RepID=F7PSH3_9BACT id=1242132 bin=RBG2 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
AB_3033_bin_53_scaffold_684_7
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5367..6155
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEF4_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB01484.1}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
AB_3033_bin_53_scaffold_684_8
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists


comp(6313..7167)
DNA (855bp) protein (285aa)
Pre-mRNA processing ribonucleoprotein, binding domain protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S0M8_FERPA
Pre-mRNA processing ribonucleoprotein, binding domain protein
Pre-mRNA processing ribonucleoprotein, binding domain protein {ECO:0000313|EMBL:ADC66269.1}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
AB_3033_bin_53_scaffold_684_9
unknown

Not on your lists

7343..7546
DNA (204bp) protein (68aa)

This feature has no annotations

AB_3033_bin_53_scaffold_684_10

Not on your lists

7543..7866
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW4_9ZZZZ
Marine sediment metagenome DNA, contig: S01H1_S01645 {ECO:0000313|EMBL:GAF87119.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
AB_3033_bin_53_scaffold_684_11
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

comp(7937..8839)
DNA (903bp) protein (301aa)
Endonuclease nuclease-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QML3_9EURY
Nuclease (SNase domain protein) {ECO:0000313|EMBL:KKP91742.1}; TaxID=1618782 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_36_12.;"
endonuclease
AB_3033_bin_53_scaffold_684_12
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

9185..9388
DNA (204bp) protein (68aa)
Transposase, IS4 family protein/SWIM domain fusion id=5044440 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
transposase family protein
Tax=AR5
AB_3033_bin_53_scaffold_684_13

Not on your lists

9472..10827
DNA (1356bp) protein (452aa)
Marine sediment metagenome DNA, contig: S06H3_L02281 {ECO:0000313|EMBL:GAI15556.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AB_3033_bin_53_scaffold_684_14
unknown

Not on your lists

11032..11178
DNA (147bp) protein (49aa)

This feature has no annotations

AB_3033_bin_53_scaffold_684_15
unknown

Not on your lists

11390..11527
DNA (138bp) protein (46aa)

This feature has no annotations

AB_3033_bin_53_scaffold_684_16
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

11617..11814
DNA (198bp) protein (66aa)
30S ribosomal protein S17e n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PX41_METTM
Ribosomal protein S17E {ECO:0000313|EMBL:AKG92132.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus ahangari.;"
rps17e; 30S ribosomal protein S17e
AB_3033_bin_53_scaffold_684_17

Not on your lists

comp(11878..12351)
DNA (474bp) protein (158aa)
Excalibur domain-containing protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0B7P1_9ARCH
Excalibur domain-containing protein {ECO:0000313|EMBL:AIF02881.1}; TaxID=1456027 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_15_E05.;"
excalibur domain-containing protein
AB_3033_bin_53_scaffold_684_18
unknown

Not on your lists

12547..13062
DNA (516bp) protein (172aa)

This feature has no annotations

AB_3033_bin_53_scaffold_684_19
unknown

Not on your lists

13121..13564
DNA (444bp) protein (148aa)

This feature has no annotations

AB_3033_bin_53_scaffold_684_20
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13611..13814)
DNA (204bp) protein (68aa)
Histone, HmtA n=4 Tax=Methanobrevibacter RepID=A5ULH1_METS3 id=5103251 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Histone, HmtA
Tax=AR20
AB_3033_bin_53_scaffold_684_21
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

14110..15108
DNA (999bp) protein (333aa)
id=18315991 bin=Nanosalinarum tax=Nanosalinarum
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
transcription factor TFIIB cyclin-related protein
AB_3033_bin_53_scaffold_684_22
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15105..15521)
DNA (417bp) protein (139aa)
id=5043700 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
AB_3033_bin_53_scaffold_684_23

Not on your lists

comp(15512..16036)
DNA (525bp) protein (175aa)
Marine sediment metagenome DNA, contig: S01H1_S31847 {ECO:0000313|EMBL:GAG31143.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=5043701 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
AB_3033_bin_53_scaffold_684_24
unknown

Not on your lists

16138..16365
DNA (228bp) protein (76aa)

This feature has no annotations

AB_3033_bin_53_scaffold_684_25
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16397..16909
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IS69_DESMD
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
AB_3033_bin_53_scaffold_684_26

Not on your lists

comp(16944..17234)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) RepID=A4FY51_METM5
Marine sediment metagenome DNA, contig: S01H4_C05360 {ECO:0000313|EMBL:GAG64836.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
AB_3033_bin_53_scaffold_684_27

Not on your lists

comp(17231..17755)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) RepID=A4FY50_METM5
Marine sediment metagenome DNA, contig: S01H1_S10328 {ECO:0000313|EMBL:GAG00735.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
AB_3033_bin_53_scaffold_684_28

Not on your lists

comp(17752..18174)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) RepID=A9A735_METM6
Marine sediment metagenome DNA, contig: S01H1_S16193 {ECO:0000313|EMBL:GAG27215.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
AB_3033_bin_53_scaffold_684_29
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(18260..19363)
DNA (1104bp) protein (368aa)
N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32)
N2,N2-dimethylguanosine tRNA methyltransferase n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QHW5_9EURY
N2,N2-dimethylguanosine tRNA methyltransferase {ECO:0000313|EMBL:EGQ42845.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
AB_3033_bin_53_scaffold_684_30
unknown

Not on your lists

19434..19643
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying items 1-30 of 56 in total

View Taxonomy