ggKbase home page

AB_3033_bin_53_scaffold_2426

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_53_scaffold_2426_1
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(3..149)
DNA (147bp) protein (49aa)
hypothetical protein; K07096 id=18313335 bin=Nanosalina tax=Nanosalina
Putative phosphoesterase, Icc family {ECO:0000313|EMBL:EGQ43107.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
AB_3033_bin_53_scaffold_2426_trna_2
unknown

Not on your lists

comp(271..393)
DNA (123bp)
transferRNA Ile
AB_3033_bin_53_scaffold_2426_2
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

664..2307
DNA (1644bp) protein (548aa)
cctA; thermosome subunit alpha id=18313789 bin=Nanosalina tax=Nanosalina
GroL; HSP60 family chaperonin
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_3033_bin_53_scaffold_2426_3
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

2372..3043
DNA (672bp) protein (224aa)
Thymidylate kinase id=3691612 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
putative thymidylate kinase
Tax=CG_Pacearch_04
AB_3033_bin_53_scaffold_2426_4
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

3173..3739
DNA (567bp) protein (189aa)
# 705315 # 705998 # 1 # ;gc_cont=0.447 id=18313790 bin=Nanosalina tax=Nanosalina
Uncharacterized protein {ECO:0000313|EMBL:EGQ43595.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
AB_3033_bin_53_scaffold_2426_5
unknown

Not on your lists

3759..4235
DNA (477bp) protein (159aa)

This feature has no annotations

AB_3033_bin_53_scaffold_2426_6
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

4284..4913
DNA (630bp) protein (210aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AEQ5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EHK00671.1}; Flags: Fragment;; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
AB_3033_bin_53_scaffold_2426_7

Not on your lists

4910..5332
DNA (423bp) protein (141aa)
Marine sediment metagenome DNA, contig: S01H1_L02231 {ECO:0000313|EMBL:GAF72315.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AB_3033_bin_53_scaffold_2426_8
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

5333..7201
DNA (1869bp) protein (623aa)
Type IV secretory pathway, VirB11 component and related ATPase involved in archaeal flagella biosynthesis n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QH31_9EURY
Type IV secretory pathway, VirB11 component and related ATPase involved in archaeal flagella biosynthesis {ECO:0000313|EMBL:EGQ43602.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
hypothetical protein
AB_3033_bin_53_scaffold_2426_9
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

7205..8098
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0A9H3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EHK02569.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
hypothetical protein
AB_3033_bin_53_scaffold_2426_10
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

8099..9001
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0A9H2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EHK02568.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
hypothetical protein
AB_3033_bin_53_scaffold_2426_11
unknown

Not on your lists

9054..9872
DNA (819bp) protein (273aa)

This feature has no annotations

AB_3033_bin_53_scaffold_2426_12
unknown

Not on your lists

9866..11524
DNA (1659bp) protein (553aa)

This feature has no annotations

AB_3033_bin_53_scaffold_2426_13
unknown

Not on your lists

11521..11859
DNA (339bp) protein (113aa)

This feature has no annotations

AB_3033_bin_53_scaffold_2426_14
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(11856..13061)
DNA (1206bp) protein (402aa)
Replication factor C large subunit n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QH37_9EURY
Replication factor C large subunit {ECO:0000256|HAMAP-Rule:MF_01508, ECO:0000256|SAAS:SAAS00009874}; Short=RFC large subunit {ECO:0000256|HAMAP-Rule:MF_01508};; Clamp loader large subunit {ECO:0000256|HAMAP-Rule:MF_01508}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
Replication factor C large subunit
AB_3033_bin_53_scaffold_2426_15
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

comp(13076..14026)
DNA (951bp) protein (317aa)
Replication factor C small subunit n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0A9F9_9EURY
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
clamp loader protein
AB_3033_bin_53_scaffold_2426_16
unknown

Not on your lists

14170..15060
DNA (891bp) protein (297aa)

This feature has no annotations

AB_3033_bin_53_scaffold_2426_17
Methanocaldococcus jannaschii, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

15089..15628
DNA (540bp) protein (180aa)
adenylate kinase (EC:2.7.4.3)
Putative adenylate kinase {ECO:0000255|HAMAP-Rule:MF_00039}; Short=AK {ECO:0000255|HAMAP-Rule:MF_00039};; EC=2.7.4.3 {ECO:0000255|HAMAP-Rule:MF_00039};; ATP-AMP transphosphorylase {ECO:0000255|HAMAP-Rule:MF_00039}; TaxID=243232 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 /; JCM 10045 / NBRC 100440) (Methanococcus jannaschii).;"
Putative adenylate kinase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSM0_METIM
AB_3033_bin_53_scaffold_2426_18
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

15697..15858
DNA (162bp) protein (54aa)
# 183565 # 183726 # -1 # ;gc_cont=0.556 id=18315703 bin=Nanosalinarum tax=Nanosalinarum
LSU ribosomal protein L40E {ECO:0000313|EMBL:EGQ40985.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
AB_3033_bin_53_scaffold_2426_trna_1
unknown

Not on your lists

16062..16173
DNA (112bp)
transferRNA Leu
AB_3033_bin_53_scaffold_2426_19
unknown

Not on your lists

comp(16191..16643)
DNA (453bp) protein (151aa)

This feature has no annotations

AB_3033_bin_53_scaffold_2426_20
unknown

Not on your lists

16702..17211
DNA (510bp) protein (170aa)

This feature has no annotations

AB_3033_bin_53_scaffold_2426_21
Candidatus Haloredivivus sp. G17, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists


17599..18906
DNA (1308bp) protein (436aa)
Signal recognition particle protein Srp54 n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AC09_9EURY
Signal recognition particle protein Srp54 {ECO:0000313|EMBL:EHK01681.1}; TaxID=1072681 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Haloredivivus.;" source="Haloredivivus sp. (strain G17).;"
GTP-binding signal recognition particle SRP54 G-domain-containing protein
AB_3033_bin_53_scaffold_2426_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18903..19931)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1L1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51857.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
UPF0104 family protein
AB_3033_bin_53_scaffold_2426_23
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19961..20392)
DNA (432bp) protein (144aa)
NUDIX hydrolase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCX6_9SPHI
NUDIX hydrolase {ECO:0000313|EMBL:EHQ25147.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
7,8-dihydro-8-oxoguanine-triphosphatase
AB_3033_bin_53_scaffold_2426_24
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

20560..20889
DNA (330bp) protein (110aa)
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
AB_3033_bin_53_scaffold_2426_25
R_OD1_Uhrbacteria_53_13, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(20979..21239)
DNA (261bp) protein (87aa)
Uncharacterized protein id=1987391 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_53_13_curated
AB_3033_bin_53_scaffold_2426_26
GWC2_OD1_41_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(21471..21953)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYR6_THEOJ
Uncharacterized protein {ECO:0000313|EMBL:KKR86682.1}; TaxID=1618985 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_41_11.;"
hypothetical protein
AB_3033_bin_53_scaffold_2426_27
GWC2_OP11_45_9b, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(22087..22605)
DNA (519bp) protein (173aa)
Putative domain HDIG-containing protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WFN0_DESOD
Uncharacterized protein {ECO:0000313|EMBL:KKU16370.1}; TaxID=1618589 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_45_9.;"
hypothetical protein
AB_3033_bin_53_scaffold_2426_28
unknown

Not on your lists

22901..23263
DNA (363bp) protein (121aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

View Taxonomy