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AB_3033_bin_60_scaffold_80

Search features with annotation key words

Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_60_scaffold_80_1
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(24..473)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JGC0_9ARCH
Nucleoside 2-deoxyribosyltransferase
Tax=RBG_13_Deltaproteobacteria_53_10_curated
AB_3033_bin_60_scaffold_80_2
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

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comp(530..826)
DNA (297bp) protein (99aa)
Transcriptional regulator n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WTX0_9EURY
putative ArsR family transcriptional regulator
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
AB_3033_bin_60_scaffold_80_3

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comp(830..1462)
DNA (633bp) protein (211aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM73337.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AB_3033_bin_60_scaffold_80_4
unknown

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comp(1463..1570)
DNA (108bp) protein (36aa)

This feature has no annotations

AB_3033_bin_60_scaffold_80_5

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1786..2103
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. MB1 RepID=U6EFA2_9EURY
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
AB_3033_bin_60_scaffold_80_6

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2100..2438
DNA (339bp) protein (113aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:KHO55807.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO55807.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] id=5241025 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
AB_3033_bin_60_scaffold_80_7

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2475..3047
DNA (573bp) protein (191aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55806.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
hypothetical protein; K07572 putative nucleotide binding protein id=5241024 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_3033_bin_60_scaffold_80_8

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3073..3897
DNA (825bp) protein (275aa)
ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase (EC:2.1.1.182)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=5241023 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
16S rRNA (Adenine1518-N6/adenine1519-N6)-dimethyltransferase {ECO:0000313|EMBL:AJF60014.1}; EC=2.1.1.182 {ECO:0000313|EMBL:AJF60014.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_60_scaffold_80_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(3898..5418)
DNA (1521bp) protein (507aa)
thymidine phosphorylase (EC:2.4.2.4)
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] id=5241021 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_80_10
R_OD1_Giovannonibacteria_45_23, Giovannonibacteria, Parcubacteria, Bacteria

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comp(5451..6005)
DNA (555bp) protein (185aa)
Putative uncharacterized protein id=4731754 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Giovannonibacteria_45_23_curated
AB_3033_bin_60_scaffold_80_11
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(6011..6868)
DNA (858bp) protein (286aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:KHE93718.1}; EC=4.1.1.23 {ECO:0000313|EMBL:KHE93718.1};; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5041874 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
AB_3033_bin_60_scaffold_80_12
AR10, Diapherotrites, DPANN, Archaea

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comp(6868..7485)
DNA (618bp) protein (206aa)
uridine monophosphate synthetase (EC:4.1.1.23 2.4.2.10)
orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase (EC:4.1.1.23 2.4.2.10); K13421 uridine monophosphate synthetase [EC:2.4.2.10 4.1.1.23] id=5241017 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_80_13
unknown

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comp(7540..9915)
DNA (2376bp) protein (792aa)

This feature has no annotations

AB_3033_bin_60_scaffold_80_14
unknown

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comp(9912..10385)
DNA (474bp) protein (158aa)

This feature has no annotations

AB_3033_bin_60_scaffold_80_15
AR10, Diapherotrites, DPANN, Archaea

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comp(10444..11718)
DNA (1275bp) protein (425aa)
dihydroorotase (EC:3.5.2.3)
dihydroorotase, multifunctional complex type; K01465 dihydroorotase [EC:3.5.2.3] id=5241016 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_80_16
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11718..12542)
DNA (825bp) protein (275aa)
pyrK; dihydroorotate dehydrogenase electron transfer subunit PyrK (EC:1.3.98.1)
2-polyprenylphenol 6-hydroxylase n=1 Tax=Desulfobacter curvatus RepID=UPI00036D4B8B
2-polyprenylphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:EIM62353.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacter postgatei 2ac9.;"
AB_3033_bin_60_scaffold_80_17
R_RIF_OD1_06_33_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(12545..13174)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B81
haloacid dehalogenase domain-containing protein hydrolase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_9_curated
AB_3033_bin_60_scaffold_80_18
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13167..14072)
DNA (906bp) protein (302aa)
pyrD; dihydroorotate dehydrogenase PyrD (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NFI7_DESTT
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
AB_3033_bin_60_scaffold_80_19
AR10, Diapherotrites, DPANN, Archaea

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comp(14083..14541)
DNA (459bp) protein (153aa)
aspartate carbamoyltransferase regulatory subunit
aspartate carbamoyltransferase regulatory chain; K00610 aspartate carbamoyltransferase regulatory subunit id=5241013 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_80_20

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comp(14538..15464)
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
hypothetical protein
putative aspartate carbamoyltransferase catalytic subunit id=5241012 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_3033_bin_60_scaffold_80_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(15495..16046)
DNA (552bp) protein (184aa)
hypothetical protein
id=5240598 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_80_22

Not on your lists

16235..17377
DNA (1143bp) protein (381aa)
cell division protein FtsZ, cell division protein FtsZ
FtsZ_1; cell division protein FtsZ; K03531 cell division protein FtsZ id=5241009 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_60_scaffold_80_23

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17443..17625
DNA (183bp) protein (61aa)
Protein translocase subunit SecE n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXB2_METFV
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
protein translocase subunit sece/sec61 gamma
AB_3033_bin_60_scaffold_80_24
unknown

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17692..18420
DNA (729bp) protein (243aa)

This feature has no annotations

AB_3033_bin_60_scaffold_80_25

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18512..18952
DNA (441bp) protein (147aa)
transcriptional antiterminator NusG
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5241007 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_60_scaffold_80_26
AR10, Diapherotrites, DPANN, Archaea

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18973..19668
DNA (696bp) protein (232aa)
50S ribosomal protein L17, large subunit ribosomal protein L11
rpl11p; 50S ribosomal protein L17; K02867 large subunit ribosomal protein L11 id=5241006 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_80_27

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19759..20424
DNA (666bp) protein (222aa)
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO55389.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
rpl1P; large subunit ribosomal protein L1
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5241005 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_3033_bin_60_scaffold_80_28

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20424..21473
DNA (1050bp) protein (350aa)
rplP0; large subunit ribosomal protein L10
rplP0; acidic ribosomal protein P0; K02864 large subunit ribosomal protein L10 id=5241004 bin=GW2011_AR10_complete species=Methanocaldococcus villosus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_60_scaffold_80_29
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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21520..21822
DNA (303bp) protein (101aa)
50S ribosomal protein L12 n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIB8_9EURY
LSU ribosomal protein L12AE
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
AB_3033_bin_60_scaffold_80_30
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

22084..24480
DNA (2397bp) protein (799aa)
hypothetical protein
ATP-dependent protease; K06870 uncharacterized protein id=5241002 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Displaying items 1-30 of 124 in total

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