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AB_3033_bin_60_scaffold_670

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_60_scaffold_670_1
GWF2_OD1_42_19, Giovannonibacteria, Parcubacteria, Bacteria

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3..4706
DNA (4704bp) protein (1568aa)
Adhesin-like protein n=1 Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3E123_METRM
Uncharacterized protein {ECO:0000313|EMBL:KKS45521.1}; Flags: Fragment;; TaxID=1618659 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWF2_42_19.;"
adhesin-like protein
AB_3033_bin_60_scaffold_670_2
unknown

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4764..4955
DNA (192bp) protein (64aa)

This feature has no annotations

AB_3033_bin_60_scaffold_670_3
unknown

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comp(4968..5195)
DNA (228bp) protein (76aa)

This feature has no annotations

AB_3033_bin_60_scaffold_670_4
AR10, Diapherotrites, DPANN, Archaea

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5306..5470
DNA (165bp) protein (55aa)
hypothetical protein
id=5241627 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_670_5
AR10, Diapherotrites, DPANN, Archaea

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5613..6089
DNA (477bp) protein (159aa)
deoxyribonuclease/rho motif-related TRAM
deoxyribonuclease/rho motif-related TRAM id=5241628 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_670_6
unknown

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6188..6355
DNA (168bp) protein (56aa)

This feature has no annotations

AB_3033_bin_60_scaffold_670_7
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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6397..7038
DNA (642bp) protein (214aa)
nth; putative endonuclease III (EC:4.2.99.18)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=866790 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobacter sp. CaT2.;"
Endonuclease III n=2 Tax=Methanothermobacter thermautotrophicus RepID=O26858_METTH
AB_3033_bin_60_scaffold_670_8
unknown

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7072..7335
DNA (264bp) protein (88aa)

This feature has no annotations

AB_3033_bin_60_scaffold_670_9

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comp(7349..7639)
DNA (291bp) protein (97aa)
Replication factor A1 {ECO:0000313|EMBL:KHO50628.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
replication factor A1
single-stranded DNA-binding protein; K07466 replication factor A1 id=5241180 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AB_3033_bin_60_scaffold_670_10
GWF2_OD1_40_10, Parcubacteria, Bacteria

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7714..8088
DNA (375bp) protein (125aa)
metallopeptidase
metallopeptidase id=5241554 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Metallopeptidase {ECO:0000313|EMBL:KKR36707.1}; TaxID=1618964 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_40_10.;"
AB_3033_bin_60_scaffold_670_11

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8690..9178
DNA (489bp) protein (163aa)
nuclease SNase-like
nuclease (SNase-like) id=5240568 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Nuclease SNase-like {ECO:0000313|EMBL:AJF59561.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_60_scaffold_670_12
unknown

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9185..9904
DNA (720bp) protein (240aa)

This feature has no annotations

AB_3033_bin_60_scaffold_670_13
Candidatus Nanosalina sp. J07AB43, Candidatus Nanosalina, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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10109..10318
DNA (210bp) protein (70aa)
topA; DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] id=18313863 bin=Nanosalina species=unknown genus=unknown taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota tax=Nanosalina
Topoisomerase DNA binding C4 zinc finger {ECO:0000313|EMBL:EGQ43671.1}; TaxID=889948 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalina.;" source="Nanosalina sp. (strain J07AB43).;"
AB_3033_bin_60_scaffold_670_14
unknown

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10432..10764
DNA (333bp) protein (111aa)

This feature has no annotations

AB_3033_bin_60_scaffold_670_15
unknown

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10868..11230
DNA (363bp) protein (121aa)

This feature has no annotations

AB_3033_bin_60_scaffold_670_16
unknown

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11271..11756
DNA (486bp) protein (162aa)

This feature has no annotations

AB_3033_bin_60_scaffold_670_17
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

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comp(11743..13101)
DNA (1359bp) protein (453aa)
MATE efflux family protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A8H3_NATTJ
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ACB85857.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 /; JW/NM-WN-LF).;"
AB_3033_bin_60_scaffold_670_18
unknown

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13153..13407
DNA (255bp) protein (85aa)

This feature has no annotations

AB_3033_bin_60_scaffold_670_19
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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13460..14380
DNA (921bp) protein (307aa)
tRNA dihydrouridine synthase B (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=1 Tax=Clostridium sp. CAG:167 RepID=R5VL99_9CLOT
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
AB_3033_bin_60_scaffold_670_20
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14494..15063
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI00035D6626
GPR1/FUN34/yaaH family protein
GPR1/FUN34/yaaH family protein {ECO:0000313|EMBL:EGJ51262.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
AB_3033_bin_60_scaffold_670_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

15111..16046
DNA (936bp) protein (312aa)
ribokinase (EC:2.7.1.15)
carbohydrate kinase PfkB; K00852 ribokinase [EC:2.7.1.15] id=5241469 bin=GW2011_AR10_complete species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_670_22
AR11, Woesearchaeaota, DPANN, Archaea

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comp(16043..16462)
DNA (420bp) protein (140aa)
Diadenosine 5'5'''-P1,P4-tetraphosphate pyrophosphohydrolase (MutT/nudix family protein) n=2 Tax=Pyrobaculum aerophilum RepID=Q7LX33_PYRAE
diadenosine 5'5'''-P1,P4-tetraphosphate pyrophosphohydrolase
Tax=AR11
AB_3033_bin_60_scaffold_670_23
unknown

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16542..16790
DNA (249bp) protein (83aa)

This feature has no annotations

AB_3033_bin_60_scaffold_670_24

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comp(16799..17710)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000378BA8A
Marine sediment metagenome DNA, contig: S12H4_C00020 {ECO:0000313|EMBL:GAI68128.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AB_3033_bin_60_scaffold_670_25
AR10, Diapherotrites, DPANN, Archaea

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comp(17755..18387)
DNA (633bp) protein (211aa)
hypothetical protein
seg id=5241473 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_670_26
unknown

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18478..19020
DNA (543bp) protein (181aa)

This feature has no annotations

AB_3033_bin_60_scaffold_670_27
unknown

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19075..19560
DNA (486bp) protein (162aa)

This feature has no annotations

AB_3033_bin_60_scaffold_670_28
unknown

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19562..19996
DNA (435bp) protein (145aa)

This feature has no annotations

AB_3033_bin_60_scaffold_670_29
unknown

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20007..21107
DNA (1101bp) protein (367aa)

This feature has no annotations

AB_3033_bin_60_scaffold_670_30
Candidatus Omnitrophus sp. SKK-01, Candidatus Omnitrophus, Omnitrophica, Bacteria

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21076..26727
DNA (5652bp) protein (1884aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003724415
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:KJJ83381.1}; TaxID=1609969 species="Bacteria; Omnitrophica; Candidatus Omnitrophus.;" source="Candidatus Omnitrophus sp. SKK-01.;"
Displaying items 1-30 of 56 in total

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