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AB_3033_bin_60_scaffold_2043

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_60_scaffold_2043_1
unknown

Not on your lists

comp(1..576)
-----------------
DNA (576bp)
protein (192aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2043_2
unknown

Not on your lists

comp(670..1827)
-----------------
DNA (1158bp)
protein (386aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2043_3
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(1971..2264)
-----------------
DNA (294bp)
protein (98aa)
hypothetical protein
Putative uncharacterized protein id=5240961 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_2043_4
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(2261..2515)
-----------------
DNA (255bp)
protein (85aa)
hypothetical protein
Putative uncharacterized protein id=5240960 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_2043_5

Not on your lists

2693..3556
-----------------
DNA (864bp)
protein (288aa)
integrase/recombinase xerd, integrase/recombinase XerD
xerD-like; integrase/recombinase xerd; K04763 integrase/recombinase XerD id=5241566 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Integrase/recombinase xerd, integrase/recombinase XerD {ECO:0000313|EMBL:AJF60557.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_60_scaffold_2043_6
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3574..3843)
-----------------
DNA (270bp)
protein (90aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WK99_METH6 id=5103191 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR17
AB_3033_bin_60_scaffold_2043_7
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

4120..4425
-----------------
DNA (306bp)
protein (102aa)
Putative uncharacterized protein id=4933086 bin=GWA2_Ignavibacteria-rel_35_8 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=AR10
AB_3033_bin_60_scaffold_2043_8

Not on your lists

4542..5123
-----------------
DNA (582bp)
protein (194aa)
hypothetical protein
seg id=5241568 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60559.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_60_scaffold_2043_9
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(5120..5572)
-----------------
DNA (453bp)
protein (151aa)
hypothetical protein
id=5241570 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_2043_trna_5
unknown

Not on your lists

comp(6103..6177)
-----------------
DNA (75bp)
transferRNA Met
AB_3033_bin_60_scaffold_2043_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(6369..6905)
-----------------
DNA (537bp)
protein (179aa)
transcription initiation factor TFIIE subunit alpha
transcription factor TFIIE subunit alpha; K03136 transcription initiation factor TFIIE subunit alpha id=5241571 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_2043_11
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(6955..7482)
-----------------
DNA (528bp)
protein (176aa)
hypothetical protein; K07254 tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] id=5241572 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
Tax=AR10
AB_3033_bin_60_scaffold_2043_12

Not on your lists

7606..8898
-----------------
DNA (1293bp)
protein (431aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=5241573 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_60_scaffold_2043_trna_1
unknown

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8958..9031
-----------------
DNA (74bp)
transferRNA Lys
AB_3033_bin_60_scaffold_2043_trna_2
unknown

Not on your lists

9092..9165
-----------------
DNA (74bp)
transferRNA Lys
AB_3033_bin_60_scaffold_2043_trna_3
unknown

Not on your lists

9209..9282
-----------------
DNA (74bp)
transferRNA Phe
AB_3033_bin_60_scaffold_2043_13

Not on your lists

9306..9941
-----------------
DNA (636bp)
protein (212aa)
Marine sediment metagenome DNA, contig: S01H1_S20213 {ECO:0000313|EMBL:GAG27507.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AB_3033_bin_60_scaffold_2043_14

Not on your lists

9990..11579
-----------------
DNA (1590bp)
protein (530aa)
lysyl-tRNA synthetase, class I (EC:6.1.1.6)
lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] id=5241588 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_60_scaffold_2043_15

Not on your lists

comp(11580..12317)
-----------------
DNA (738bp)
protein (246aa)
hypothetical protein
hypothetical protein id=5241590 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60581.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_60_scaffold_2043_16
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(12395..14275)
-----------------
DNA (1881bp)
protein (627aa)
GTP pyrophosphokinase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A9Z8_CARHZ id=5102885 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
GTP pyrophosphokinase
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
AB_3033_bin_60_scaffold_2043_17
RBG_13_Spirochaetes_51_14_curated, Spirochaetes, Bacteria

Not on your lists

14348..14683
-----------------
DNA (336bp)
protein (112aa)
Magnesium and cobalt transport protein n=7 Tax=Pseudomonas syringae pv. actinidiae RepID=F3HZS8_PSESF
magnesium and cobalt transport protein
Tax=RBG_13_Spirochaetes_51_14_curated
AB_3033_bin_60_scaffold_2043_18

Not on your lists

14738..15424
-----------------
DNA (687bp)
protein (229aa)
triosephosphate isomerase TIM (EC:5.3.1.1)
triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] id=5241598 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_60_scaffold_2043_19
unknown

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15444..15752
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2043_20
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15756..16163)
-----------------
DNA (408bp)
protein (136aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GDN2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM76007.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
AB_3033_bin_60_scaffold_2043_21
unknown

Not on your lists

16285..16923
-----------------
DNA (639bp)
protein (213aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2043_22

Not on your lists

comp(17270..18217)
-----------------
DNA (948bp)
protein (316aa)
radA; DNA repair protein RadA
radA; DNA repair and recombination protein RadA; K04483 DNA repair protein RadA id=5241615 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_60_scaffold_2043_23
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(18341..19657)
-----------------
DNA (1317bp)
protein (439aa)
replication factor A1
nucleic acid binding OB-fold tRNA/helicase-type; K07466 replication factor A1 id=5241616 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_2043_24
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19708..20415
-----------------
DNA (708bp)
protein (236aa)
Beta-lactamase domain protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RG26_ARCPA
beta-lactamase
Tax=RBG_16_Deltaproteobacteria_49_23_curated
AB_3033_bin_60_scaffold_2043_25
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

20447..21226
-----------------
DNA (780bp)
protein (260aa)
geranylgeranylglyceryl phosphate synthase; K07094 putative glycerol-1-phosphate prenyltransferase [EC:2.5.1.-] id=5241617 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
Tax=AR10
AB_3033_bin_60_scaffold_2043_26

Not on your lists

comp(21231..22133)
-----------------
DNA (903bp)
protein (301aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
nucleoside-diphosphate-sugar epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] id=5241621 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AJF60612.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AJF60612.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Displaying items 1-30 of 57 in total

View Taxonomy