ggKbase home page

AB_3033_bin_60_scaffold_2316

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AB_3033_bin_60_scaffold_2316_1
unknown

Not on your lists

1..276
DNA (276bp) protein (92aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2316_2
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

411..1274
DNA (864bp) protein (288aa)
hypothetical protein
transmembrane_regions id=5240667 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_2316_3
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

1410..1685
DNA (276bp) protein (92aa)
albA; archaea-specific DNA-binding protein
albA; DNA/RNA-binding protein albA; K03622 archaea-specific DNA-binding protein id=5240666 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_2316_4
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

1763..2257
DNA (495bp) protein (165aa)
Transcription elongation factor NusA-like protein n=2 Tax=Methanothermobacter thermautotrophicus RepID=T2GIS4_METTF
nusA; transcription elongation factor NusA-like protein
Uncharacterized protein {ECO:0000313|EMBL:AAB85706.1}; TaxID=187420 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 /; JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium; thermoautotrophicum).;"
AB_3033_bin_60_scaffold_2316_5
unknown

Not on your lists

2300..3202
DNA (903bp) protein (301aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2316_6
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

3307..3792
DNA (486bp) protein (162aa)
hypothetical protein
Putative uncharacterized protein id=5240662 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_2316_7
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(3902..4261)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371FEE0
HxlR-like helix-turn-helix
Candidatus Methanoplasma termitum strain MpT1, complete genome {ECO:0000313|EMBL:AIZ57043.1}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;" source="Candidatus Methanoplasma termitum.;"
AB_3033_bin_60_scaffold_2316_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4465..4902
DNA (438bp) protein (146aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TN05_ALKMQ
Uncharacterized protein {ECO:0000313|EMBL:KCZ70363.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
4Fe-4S ferredoxin
AB_3033_bin_60_scaffold_2316_9

Not on your lists

4964..5206
DNA (243bp) protein (81aa)
Marine sediment metagenome DNA, contig: S12H4_S02227 {ECO:0000313|EMBL:GAI93152.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Glutaredoxin-like protein, YruB-family id=4800151 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
glutaredoxin-like protein, YruB-family
AB_3033_bin_60_scaffold_2316_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

5296..6096
DNA (801bp) protein (267aa)
hypothetical protein
transmembrane_regions id=5240667 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_2316_11
unknown

Not on your lists

comp(6104..6592)
DNA (489bp) protein (163aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2316_12

Not on your lists

6652..7947
DNA (1296bp) protein (432aa)
hypothetical protein
hypothetical protein; K06915 id=5240661 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59654.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
AB_3033_bin_60_scaffold_2316_13
unknown

Not on your lists

comp(7937..8650)
DNA (714bp) protein (238aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2316_14

Not on your lists

8745..11057
DNA (2313bp) protein (771aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55790.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
AB_3033_bin_60_scaffold_2316_15
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(11227..11475)
DNA (249bp) protein (83aa)
hypothetical protein id=5050138 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=RBG_16_Micrarchaeota_36_9_curated
AB_3033_bin_60_scaffold_2316_16
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(11472..11741)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GWI9_9EURY
hypothetical protein
Tax=CG_Pacearch_03
AB_3033_bin_60_scaffold_2316_trna_2
unknown

Not on your lists

comp(11850..11921)
DNA (72bp)
transferRNA Val
AB_3033_bin_60_scaffold_2316_17
unknown

Not on your lists

11980..13014
DNA (1035bp) protein (345aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2316_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13250..13891
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ34_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46720.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 /; NCIMB 13541) (Haloarcula mukohataei).;"
AB_3033_bin_60_scaffold_2316_trna_1
unknown

Not on your lists

comp(13986..14104)
DNA (119bp)
transferRNA Leu
AB_3033_bin_60_scaffold_2316_19
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(14095..15030)
DNA (936bp) protein (312aa)
Tax=RBG_16_Pacearchaeota_35_8_curated
AB_3033_bin_60_scaffold_2316_20
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


comp(15523..16110)
DNA (588bp) protein (196aa)
putative deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] id=5240636 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
Tax=AR10
AB_3033_bin_60_scaffold_2316_21
unknown

Not on your lists

comp(16114..17046)
DNA (933bp) protein (311aa)

This feature has no annotations

AB_3033_bin_60_scaffold_2316_22
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

17152..18837
DNA (1686bp) protein (562aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C82BB
sodium/hydrogen exchanger
Possible sodium/proton antiporter {ECO:0000313|EMBL:CAF30040.1}; TaxID=267377 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus maripaludis (strain S2 / LL).;"
AB_3033_bin_60_scaffold_2316_23
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

18850..19200
DNA (351bp) protein (117aa)
hypothetical protein
id=5241790 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
AB_3033_bin_60_scaffold_2316_24
CG_CPR06_01, CG_CPR06, Bacteria

Not on your lists

19283..19867
DNA (585bp) protein (195aa)
Rubrerythrin n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GIQ6_METTF
rubrerythrin
Tax=CG_CPR06_01
AB_3033_bin_60_scaffold_2316_25
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

19878..20399
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BJY8_9EURY
hypothetical protein
Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
AB_3033_bin_60_scaffold_2316_26
GWC2_OD1_i_40_12, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

20415..20801
DNA (387bp) protein (129aa)
Desulfoferrodoxin n=3 Tax=Desulfovibrio vulgaris RepID=DFX_DESVH
Desulfoferrodoxin {ECO:0000313|EMBL:KKR44040.1}; TaxID=1618699 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_40_12.;"
rbO; desulfoferrodoxin
AB_3033_bin_60_scaffold_2316_27
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20783..21337
DNA (555bp) protein (185aa)
Rubrerythrin n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAI0_METEZ
rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:ADI74979.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
AB_3033_bin_60_scaffold_2316_28
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(21343..21981)
DNA (639bp) protein (213aa)
N-glycosylase/DNA lyase (EC:4.2.99.18 3.2.2.-)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] id=5241327 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Woesearch_02
Displaying items 1-30 of 40 in total

View Taxonomy